Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02104 AGAAAGCCGCAGAAGAATAAGAGCATCATGGTTAGGCTTAGGCTATGGTGGTCTTCTATCTTGATTACATTTACACTTTTATTCCAACATCTCAGATTTTGTACTTGTGGGAGTGTGCAAACTCCAACACCCCCTTTGCCAATTCTTCCTCTCCCAGCATACTCCCAGATTAAATGGCAACAAAGGGAGATCATAATGTTCCTCCACTTTGGTGTCAATACATTCACTGACAGAGAATGGGGCACTGGCCAGGAAAACCCGGCAATCTTCAATCCCACAGGGCTCAAGACCGCCCAGTGGGCCACTGTGGCAGCCGACGCAGGAATTTCATTGATGATACTTACTGCTAAGCACCATGATGGCTTCTGTCTCTGGCCTTCCAACTACACTGAGCATTCTGTCATCAGCAGCCCTTGGCAAGGTGGCAAGGGTGATGTTGTTCAAGACTTTGTCACTGCAGCCACTGCACAGGGAATTGATGTAGGGATCTACCTTTCACCTTGGGATAGACATGACCCTAGATATGGTAATGATTTGCTTTACAACCAATATTACTTGGCTCAATTGCAGGAGTTGCTCAAGAAGTATCAAAATGTAAGAGAAATTTGGTTCGATGGAGCAAAGGGTGACCACGCAAAAAATATGTCCTATTACTTTTCAGATTGGTTTTCTATGGTGAAGGAGCTACAGAGTTCCATCAACATCTTCTCCGATGCCGGTCCTGATGTTAGGTGGGTGGGACAAGAAACAGGTTCTGCAGGATACACATGTTGGTCTACCATTAATCGAACCGCTTTGTCGATTGGAAATTCTAGCATCACTGAGTATTTGAACACTGGTGATCCAAGAGGGACAGATTGGCTGCCAGCGGAATGTGATGTCTCAATTCGACCGGGATGGTTTTGGCATAATTCACAATCACCAAAAAAGCTGAGCGAGTTGCTTGATATTTATTACAACTCAGTTGGGAGAAATTGTGTGTTACTCCTCAATGTACCTCCAAATAAAAGTGGCCTTATAAGTGATGTTGATGCTGAAAGATTGAAAGAGTTTAGAAGTGCAATTAACACTATTTTTCATCTCAATCTTGCTCAAGATTGCTTTGTTAAAGTTAGTAGCCAAAGACAAGGTTTCGGAGCAGAAAACGTGCTAGACAGTGACCACTTGTGGTCCTATTGGGCCCCAAAGGATGATGAGGGTGAAAAGGAGCATTGGATTGAGATTTGGGCAAAGGAAGGGGTTTTTTTGAGATTCAACGTGATTAGAATACAAGAGGCAATTGGACTTGGCCAAAGGATCGAACAGCATAAAATCTATGCGGATGGTAAACTAATGGTCAACGCAACAACAGTGGGTTACAAGAGGCTTCATAGGCTTGATAAGGGTGAGGTGCAGGCTCGTGTTGTGAGGATCACAATAAAAAAAGCAAGAGCAGTGCCTCTAATTTCTTCCATTGGCTTGTATTTTGATCCTTTTTGGCACTCTAAATTTACTTTAACCCCAAGAACCATAACTGCATAA 1521 0.4333 RKPQKNKSIMVRLRLWWSSILITFTLLFQHLRFCTCGSVQTPTPPLPILPLPAYSQIKWQQREIIMFLHFGVNTFTDREWGTGQENPAIFNPTGLKTAQWATVAADAGISLMILTAKHHDGFCLWPSNYTEHSVISSPWQGGKGDVVQDFVTAATAQGIDVGIYLSPWDRHDPRYGNDLLYNQYYLAQLQELLKKYQNVREIWFDGAKGDHAKNMSYYFSDWFSMVKELQSSINIFSDAGPDVRWVGQETGSAGYTCWSTINRTALSIGNSSITEYLNTGDPRGTDWLPAECDVSIRPGWFWHNSQSPKKLSELLDIYYNSVGRNCVLLLNVPPNKSGLISDVDAERLKEFRSAINTIFHLNLAQDCFVKVSSQRQGFGAENVLDSDHLWSYWAPKDDEGEKEHWIEIWAKEGVFLRFNVIRIQEAIGLGQRIEQHKIYADGKLMVNATTVGYKRLHRLDKGEVQARVVRITIKKARAVPLISSIGLYFDPFWHSKFTLTPRTITA* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02104 506 PANTHER ALPHA-L-FUCOSIDASE 22 495 IPR000933 GO:0004560|GO:0005975
Lapu7g02104 506 SMART alpha_l_fucos 41 374 IPR000933 GO:0004560|GO:0005975
Lapu7g02104 506 SUPERFAMILY (Trans)glycosidases 46 356 IPR017853 -
Lapu7g02104 506 Gene3D - 368 489 - -
Lapu7g02104 506 FunFam Putative alpha-L-fucosidase 1 45 364 - -
Lapu7g02104 506 Gene3D Glycosidases 47 364 - -
Lapu7g02104 506 PRINTS Glycosyl hydrolase family 29 signature 313 334 IPR016286 GO:0004560|GO:0006004
Lapu7g02104 506 PRINTS Glycosyl hydrolase family 29 signature 111 127 IPR016286 GO:0004560|GO:0006004
Lapu7g02104 506 PRINTS Glycosyl hydrolase family 29 signature 159 178 IPR016286 GO:0004560|GO:0006004
Lapu7g02104 506 Pfam Alpha-L-fucosidase 88 351 IPR000933 GO:0004560|GO:0005975
Lapu7g02104 506 SUPERFAMILY Galactose-binding domain-like 360 480 IPR008979 -
Lapu7g02104 506 FunFam Alpha-L-fucosidase 1 371 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02104 Lapu-Chr7 37354287 37356534 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02104 K01206 - gmx:100775293 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02104 7 37354287 37356534 Lapu7g02104 7 37354287 37356534 ECH