Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02094 ATGGCTTTCTCTTCTAAACTTGACAACTTCATCCTCTCTGCCTACAAACCCCAAAATTCCACTGCCCCACTTTCAAAAATCCAACCTTCCTCCTTCCTCCCATGTCCTTCTTCCTTGAAGCCTCAAAAGCTCCCCTCCAGAATCCGCTACGGTTCAACCATCAGAGCCACATCATCATCCTCATCCCCTTCCACAACCATTGCTGAACCTGAAGGCATTAAGATTAATTCGATTCCAACCAAACCCATTGAAGGACAAAAGACTGGTACTAGTGGGCTCCGGAAGAAGGTGAAAGTGTTTATGCAAGAAAATTACCTTGCAAATTGGATCCAGGCCCTGTTTAATTCATTGCCTCCGGAGGATTACAAGAATGGTTTGTTAGTGTTGGGTGGTGATGGTCGATATTTTAATCGGGAAGCTGCACAGATAATAATCAAAATTGCTGCTGGAAATGGTGTTGGAAAAATTCTGGTTGGAAAGGAAGGTGTATTGTCAACACCAGCTGTTTCTGCAGTAATAAGAAAGCAAAAGGCAAATGGTGGATTTATTATGAGCGCAAGCCATAATCCAGGTGGGCCTGAATATGATTGGGGTATTAAGTTTAATTACAGCAGTGGACAACCTGCACCAGAATCCATCACTGACAAGATTTATGGAAACACGCTATCCATCTCTGAGATAAAGATAGCTGACGTTCCTGATGTTGATTTATCAAAAATTGGGGTTACAAAGTTTGGAAGCTTCAATGTGGAAGTAATAGACCCAGTCTCTGACTATCTGGAGCTACTGGAGACAGTATTTGATTTTCAGCTAATCAAAGGTCTTCTTTCACGTCCAGATTTTAGGTTTATATTTGATGCCATGCATGCAGTTACTGGTGCTTATGCTAAACCTATCTTCGTTGACAAACTTGGTGCTAGTCTGGATTCAATTTCAAATGGAATTCCTTTGGAAGATTTTGGACATGGCCATCCTGATCCTAATCTAACCAGATATGCAAAGGATCTTGTCAACATTCTGTATGCTGAAAATGGACCTGATTTCGGAGCAGCCAGTGATGGGGATGGTGATAGAAATATGATTCTAGGAAGAAGTTTCTTTGTAACTCCTTCAGACTCTGTAGCAGTTATTGCAGCCAATGCAGAAGCAATTCCGTACTTCAAGAACGGTGTTAAGGGTCTAGCTCGATCAATGCCCACAAGTGGTGCTCTAGATCGTGTTGCTGAAAAACTGAACCTCCCTTTCTTTGAGGTCCCCACTGGATGGAAATTTTTTGGGAATCTTATGGATGCTGGGAATTTGTCAGTTTGCGGGGAAGAGAGTTTTGGTACAGGTTCTGACCACATTCGTGAGAAAGATGGCATCTGGGCTGTCTTAGCTTGGCTTTCTATTATTGCACATCGCAACAAAGACAAGAAGCCGGGGGAGAAATTGATCTCCGTAGCTGACGTAGTGAAGGAGCACTGGGCAACTTATGGAAGGAATTTCTTCTCTAGATATGACTACGAGGAATGTGAATCTGAAGGTGCCAATAAGATGATAGAATACCTACGAGATATTGTATCCAAGAGCAAGGCCGGTGATAAGTATGGAAGTTATGTCCTCCAGTTTGCAGATGATTTTACATACACCGATCCTGTAGACGGAAGTGTGGTTTCAAAACAAGGCGTTCGGTTTGTTTTTACAGATGGCTCAAGGATTATATATCGTTTATCAGGAACTGGTTCTGCAGGGGCTACTGTTAGAGTGTACATCGAACAGTTTGAACCACATGTTTCTAAACATGATGTTGAAGCTCAAATTGCCTTAAAACCATTAATAGATTTGGCAATATCCGTGTCAAAGCTCAAAGACTTCACAGGGAGGGAGCAACCTACAGTGATCACATAA 1890 0.4228 MAFSSKLDNFILSAYKPQNSTAPLSKIQPSSFLPCPSSLKPQKLPSRIRYGSTIRATSSSSSPSTTIAEPEGIKINSIPTKPIEGQKTGTSGLRKKVKVFMQENYLANWIQALFNSLPPEDYKNGLLVLGGDGRYFNREAAQIIIKIAAGNGVGKILVGKEGVLSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKIADVPDVDLSKIGVTKFGSFNVEVIDPVSDYLELLETVFDFQLIKGLLSRPDFRFIFDAMHAVTGAYAKPIFVDKLGASLDSISNGIPLEDFGHGHPDPNLTRYAKDLVNILYAENGPDFGAASDGDGDRNMILGRSFFVTPSDSVAVIAANAEAIPYFKNGVKGLARSMPTSGALDRVAEKLNLPFFEVPTGWKFFGNLMDAGNLSVCGEESFGTGSDHIREKDGIWAVLAWLSIIAHRNKDKKPGEKLISVADVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRDIVSKSKAGDKYGSYVLQFADDFTYTDPVDGSVVSKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPHVSKHDVEAQIALKPLIDLAISVSKLKDFTGREQPTVIT* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02094 629 Gene3D - 475 629 - -
Lapu7g02094 629 SUPERFAMILY Phosphoglucomutase, first 3 domains 75 287 IPR016055 GO:0005975|GO:0016868
Lapu7g02094 629 FunFam Phosphoglucomutase 5 74 262 - -
Lapu7g02094 629 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 258 362 IPR005845 GO:0005975
Lapu7g02094 629 Gene3D - 74 262 - -
Lapu7g02094 629 Gene3D - 367 464 - -
Lapu7g02094 629 FunFam Phosphoglucomutase 5 263 366 - -
Lapu7g02094 629 Gene3D - 263 366 - -
Lapu7g02094 629 SUPERFAMILY Phosphoglucomutase, C-terminal domain 494 629 IPR036900 GO:0016868|GO:0071704
Lapu7g02094 629 FunFam Phosphoglucomutase, cytoplasmic 1 367 464 - -
Lapu7g02094 629 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 370 492 IPR005846 GO:0005975|GO:0016868
Lapu7g02094 629 FunFam Phosphoglucomutase 5 475 629 - -
Lapu7g02094 629 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 86 225 IPR005844 GO:0005975|GO:0016868
Lapu7g02094 629 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 552 604 IPR005843 GO:0016868|GO:0071704
Lapu7g02094 629 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 181 190 IPR016066 GO:0000287
Lapu7g02094 629 SUPERFAMILY Phosphoglucomutase, first 3 domains 257 367 IPR016055 GO:0005975|GO:0016868
Lapu7g02094 629 CDD PGM1 78 629 - -
Lapu7g02094 629 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 73 629 IPR045244 GO:0004614|GO:0005975
Lapu7g02094 629 SUPERFAMILY Phosphoglucomutase, first 3 domains 354 499 IPR016055 GO:0005975|GO:0016868
Lapu7g02094 629 PRINTS Phosphoglucomutase/phosphomannomutase family signature 280 299 IPR005841 GO:0005975|GO:0016868
Lapu7g02094 629 PRINTS Phosphoglucomutase/phosphomannomutase family signature 180 194 IPR005841 GO:0005975|GO:0016868
Lapu7g02094 629 PRINTS Phosphoglucomutase/phosphomannomutase family signature 316 329 IPR005841 GO:0005975|GO:0016868
Lapu7g02094 629 PRINTS Phosphoglucomutase/phosphomannomutase family signature 346 361 IPR005841 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02094 Lapu-Chr7 37233611 37252360 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02094 K01835 - gmx:100802730 1184.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02094 7 37233611 37252360 Lapu7g02094 7 37233611 37252360 ECH