Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02048 ATGAGAGCGGACTCAAACGTTGTGTTCCTTGTCCCTTTGGCTTTGTTGTTCCTTACTGCCCTTCCACAATTGTGCTTGTGTGGAAATTCAACCTCTGGTCACACATTGGAAGAGCGGCAAGCTCTTCAAAGATTCAAAGCAAGTTTCTCCAACAGCTCCATGTTTGTTTCTTGGGAAGGAAATGATCACTGCCAGTGGAAAGGAGTGCAATGTGATGGTGATGGTCGCACCGGACGCGTTGTCAAACTTGTTCTCCATTGGCAAAAGACATGCAATTGTCGACACATCTCTATATGCACGTGCTCATCACAAAATTCTAATGGCATTCACCCTTCTATATTGGAGTTGAAACACTTGAACTATCTGGAACTCACAGGAATCTCTTTTGGCCATGGTCCAATACCAGCATTCCTTGCTTCCATGAAGCAACTGACACATCTTAACCTCTCTCACTGTGATTTCATGGGAAAGGTTCCTCACCAACTTGGTAATCTTTTAAACTTGCAGGTTCTTGATTTCAGTGGAAATCCTTTAGATGTTGATGATGTGGCTTGGCTTTCGAAACTTTCATCACTGAAACACCTAGCAATGAACGGAGTGGACCTTGGAGAGGCATATAATCTATTGCAGGTGCTTGATACCCTTCCTTTCTTGTTGCAAGTAGAGTTTAGCGGATGTGATCTTACCAACATGAACTTTCCTGCTGGCCATGTTAATTCTACCTTTCTTGCCAATGTTCAAGTTCTTAATCTTGCTCAAAATTTACTTTCTGATCCTGTGCCCGATGCTTTTCTGAACATGAGTTCAATTGTAGACCTCAACCTTGGTTACAACAATCTCACTTCACTTCCAAATTGGTTGGTTAATCTTGATGCCCTTGTCAATCTTAATCTTTCTGGTAATCCCTTCAAGAGGATTGAAGCCTCCGTGATATCTATCTTGACAAACATGTGCTCTCTCCGATCATTAGACTTGTCATCTAGCATGCCTATTTTTGGAGGGTCGGGGCTAGGTCATGGAAACTATTCGGGATGTGGGAGATACGATTTGGAAGTTTTAGTGTTAAGAGGAAATGGAATTAAGGATAGTTTGCCAAGTTGGTTTGGACAATTGTCAAATTTGAATATCCTTGATCTTGCAATGAATTTATTCTATGGTCCAATTCCGTCATCCTTTGGAAATTTGTTGGCCTTGACGGCATTAAATCTTTCGGATAATCAACTACATGGGTCAATTCCAGCTACCTTTGGACGGTTGTCATCTCTAGGTTTATTAGATCTTTCTAATAATCACTTGAATGGAAGCATTCCTGAAAGCCTTGGACAACTGAGGAATCTAGTGACCTTAAGGATGGTTAATAACTCATTCACAGGTGTCATATCTGAGATTCACCTTCGTAACCTCTCAAATTTGATAGAATTTCAAATAGGATTCAACAATCTTGATGTGAAAACAGAGTCCGATTGGAAACCACCTTTCAAGTATTTACAAGTCCTTGGAATGGCCAACAATAATGTGACACATTTTCCTCAGTGGGTTCAAACACAGGAGCAACTTTTTAAATTAGACATCTCCAACAATCAGATTAGTGGATATATCCCAAAAGATTTTGGCCATCATCTTCCAAACTTGTATATGCTAAATCTCCATACCAACCTTATAGAAGGTTCAATACCAGACTCATTGTGCAAGATGGAAAGCCTGTTCATCCTTGATCTCTCCGAAAACATATTTTCTGGCACAATTCCTAATTGTTGGGGAAGACAGTTTTTCTCGGTCTTAAATCTGGCAGCAAATCGGTTATCCGGGACCATTCCAAACTCATTTGGGAATCTTACGGTGGGATGGTTGAATTTGAGCAACAACAGACTCCTTGGAGAGCCTTTTCAAGCCTTGCAAAGCAACGAATGGTTGCAGATTTTGGATCTTGGTGGGAATCAATTTACAGGAAAAATACCTTCTTGGTGGGCAGCAGAAGCTCTTCTTGAAAATCTGAGACTGAGAGAGAATTTGTTCAGTGGTGATATTCCAACATCTCTCTGCCAGTTCTATAATTTGAAAATCCTGGACCTTGCTGACAATAATTTGTCAGGTTCAATCCCCCCTTGCATCGGTGATTTCCGGGGTATGATGATAAAAGGAGTTGAAGCACCACCTGCATTCACTTATAATGCAGATGAATGGGAAAAAAGGCATTTCAAGCAATTTCTGAAAGGAAATGAATATGATTATACAAAAAAATACGCGTATCCACACTTGGTAAACATAGACTTGTCGAGTAACAGTCTCACGGGATCAATCCCTGACGACTTAACCTCTCTTTCAGGATTGATCGGCTTGAATTTATCACACAATCACTTGTCAGGAAAAATCCCAAGCAATATGCAGAAAATGAAATCACTGGAGTCTCTTGATTTTTCAAACAACAACCTTTCTGGTCCCATCCCAACCGACATGCCCATCATGGATAATCTAGGTTTCTTAAACTTGTCCTACAACAATTTATCTGGTTTCATTCCAACAAACGATCATTTCCTCACATTTGACAATGGATCTTTCGCTGGCAATCCACATCTCTGCGGAGGACCCCTAGCGAATAAATGTTCCATTAGTGACGGGGTACCTACCAGCGGGAGGGATGAAGAAAACAAGGAGAATGGTGATAAGAAAGAAAAGGTGTTGTTTTACTTTGTGATTGCAGTTGGGTTCATAACAGGGTTTTGGGCATTCTTCGGAACTCTGCTGCTCAAGAGGGAATGGAGACACGCTTACTTTCTTTATGCGGATGGGGTTGTAGATAGGATTTATGTAGCAATGATGGTAAGATTAGCAAGCCTGGAAAACTGA 2847 0.4092 MRADSNVVFLVPLALLFLTALPQLCLCGNSTSGHTLEERQALQRFKASFSNSSMFVSWEGNDHCQWKGVQCDGDGRTGRVVKLVLHWQKTCNCRHISICTCSSQNSNGIHPSILELKHLNYLELTGISFGHGPIPAFLASMKQLTHLNLSHCDFMGKVPHQLGNLLNLQVLDFSGNPLDVDDVAWLSKLSSLKHLAMNGVDLGEAYNLLQVLDTLPFLLQVEFSGCDLTNMNFPAGHVNSTFLANVQVLNLAQNLLSDPVPDAFLNMSSIVDLNLGYNNLTSLPNWLVNLDALVNLNLSGNPFKRIEASVISILTNMCSLRSLDLSSSMPIFGGSGLGHGNYSGCGRYDLEVLVLRGNGIKDSLPSWFGQLSNLNILDLAMNLFYGPIPSSFGNLLALTALNLSDNQLHGSIPATFGRLSSLGLLDLSNNHLNGSIPESLGQLRNLVTLRMVNNSFTGVISEIHLRNLSNLIEFQIGFNNLDVKTESDWKPPFKYLQVLGMANNNVTHFPQWVQTQEQLFKLDISNNQISGYIPKDFGHHLPNLYMLNLHTNLIEGSIPDSLCKMESLFILDLSENIFSGTIPNCWGRQFFSVLNLAANRLSGTIPNSFGNLTVGWLNLSNNRLLGEPFQALQSNEWLQILDLGGNQFTGKIPSWWAAEALLENLRLRENLFSGDIPTSLCQFYNLKILDLADNNLSGSIPPCIGDFRGMMIKGVEAPPAFTYNADEWEKRHFKQFLKGNEYDYTKKYAYPHLVNIDLSSNSLTGSIPDDLTSLSGLIGLNLSHNHLSGKIPSNMQKMKSLESLDFSNNNLSGPIPTDMPIMDNLGFLNLSYNNLSGFIPTNDHFLTFDNGSFAGNPHLCGGPLANKCSISDGVPTSGRDEENKENGDKKEKVLFYFVIAVGFITGFWAFFGTLLLKREWRHAYFLYADGVVDRIYVAMMVRLASLEN* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02048 948 Pfam Leucine rich repeat 350 408 IPR001611 GO:0005515
Lapu7g02048 948 Pfam Leucine rich repeat 521 576 IPR001611 GO:0005515
Lapu7g02048 948 Pfam Leucine rich repeat 751 811 IPR001611 GO:0005515
Lapu7g02048 948 Pfam Leucine rich repeat 245 302 IPR001611 GO:0005515
Lapu7g02048 948 Gene3D Ribonuclease Inhibitor 491 591 IPR032675 -
Lapu7g02048 948 PANTHER LRR RECEPTOR-LIKE KINASE 349 416 - -
Lapu7g02048 948 Gene3D Ribonuclease Inhibitor 592 871 IPR032675 -
Lapu7g02048 948 SUPERFAMILY L domain-like 61 327 - -
Lapu7g02048 948 Gene3D Ribonuclease Inhibitor 345 490 IPR032675 -
Lapu7g02048 948 Gene3D Ribonuclease Inhibitor 242 344 IPR032675 -
Lapu7g02048 948 Pfam Leucine rich repeat N-terminal domain 37 72 IPR013210 -
Lapu7g02048 948 SMART LRR_typ_2 683 707 IPR003591 -
Lapu7g02048 948 SMART LRR_typ_2 267 290 IPR003591 -
Lapu7g02048 948 SMART LRR_typ_2 165 188 IPR003591 -
Lapu7g02048 948 SMART LRR_typ_2 419 443 IPR003591 -
Lapu7g02048 948 SMART LRR_typ_2 243 266 IPR003591 -
Lapu7g02048 948 SMART LRR_typ_2 774 797 IPR003591 -
Lapu7g02048 948 SMART LRR_typ_2 798 822 IPR003591 -
Lapu7g02048 948 SMART LRR_typ_2 541 565 IPR003591 -
Lapu7g02048 948 SMART LRR_typ_2 395 418 IPR003591 -
Lapu7g02048 948 SUPERFAMILY L domain-like 349 613 - -
Lapu7g02048 948 Pfam Leucine Rich Repeat 143 165 IPR001611 GO:0005515
Lapu7g02048 948 Pfam Leucine Rich Repeat 685 705 IPR001611 GO:0005515
Lapu7g02048 948 SUPERFAMILY RNI-like 547 840 - -
Lapu7g02048 948 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 365 460 - -
Lapu7g02048 948 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 748 868 - -
Lapu7g02048 948 Gene3D Ribonuclease Inhibitor 35 241 IPR032675 -
Lapu7g02048 948 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 489 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02048 Lapu-Chr7 36701077 36715989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02048 37 925 Receptor kinase-like Gene Family AT4G13920 29.362 2.68e-74 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02048 - - vum:124837490 1587.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02048 7 36701077 36715989 Lapu7g02048 7 36701077 36715989 ECH