Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02040 ATGGTTACACAGTTCGGCGTCAAACTCGCCGTCCACCTCATCACCAACCACTTCGGCAATCTCGTCGCTAAAGTATGCGAAAATCTATTTAGTCATGGATCCCTCACTTTGGATCAATTGATTCGCTACTCGGAGCTTACTAAGGACCAAGTCAAGAACTCCCTACTCGTCTTAGTCCAACACAATTGTTGCCAAGCATTTGTTTCTGCTCCCGAAGATGACGATGATGATGTAGACAGATTGAGAGTTAGAACTCAGTATTTGGTGTTGTTTGATAACATAATCCATCGATTGAGATTTCCCAAATTCTTGGAGACTGTGTCGCGGAACCTTGATGAAGAATGTGTGGAACTTCTTGATGGTTTGCTTCGCGATGGGAGGCTTACCCTGAAACAAATGGTTGACAGAGCAAGTCAAGGGAAAGAAAATGCCGTGGATACAAAAGTTGTACGAGAGATACTCTGTAAACTTTTAAAAGCTCGACTGGTTGAACGCTGCCCTGCCGCTGAGCCAGTTGTTTCTACCTCATTTAAAGAAACTACTACAAGGAAGCGGGGTGCTAAGTCTGCCAAGATATTTGAAGCACCCGAGACACTAGAACAACGTGTTCTAGAAGCAGCAGTGCCTGGGGATGCAATCAGATTTTCTTTCACTGCGGAAATGAGATCTAATGTTGACAGAGAAACAAATTCAGATGATGATCAAATTATTAGTGTTGAAGAGAATGTTGCAAAAGAAGAGGAAATTCTTTGGCGTGCAAATTTTGAGGAGTTTGTTCGTCATCTTAGGCATAAGGCATTGATTGAGAATATAAGAACTCAGCACGATGATGGAACTGCTACTGTCTTAAGTGCAGTATTGGAGGCAACAAAAACTGTAGAGAAAAAAGTAAAAATGGAGAATTCAGTTCCTTTGTCACTGGATACAATTATGGCAGAGGTGATGAAGACCGATGCAGGACGAACGATGACCATTGATCGTATTAGAGCTTCCCTTAGCCAGTTGGGCTGTTCACAGAGGATGATTGTAGATGATGCATATAGTATTGATTTGAAGAAAATTATCGAACGGGGTCGAAATGAAGAGGTTGAGTCAATTGTGTTGAAAAGGTATGGAAGGGATGCGTACAGAATGTTCAGGCTACTGTCAAAGGATAGTTGTTTTCATGACACAGATCAGATAGCAGCATCTACTCTGGTCGAGAAAAAGGAAGCTCCAAAGTTGCTATATAAGTTGTGGAAGGACAATTACTTGTATATGGAGAAAGTAGTTGCGACGGGAGTCAAGCAAACAACTATTTTGATGTGGAAAGTCAACAAACCTTTACTTTGGGAACATGTACTGGACGAGATGTACCACGCTGCCTTAAATTTGAGCCTAAGAATGGCTTTTGAGCAGGAAAAGGATGAAGAGCTTTTAAACGTTCCTAAAGACAAGCTTAAGGAGCCAGGGCCACTGCAGAAGAAATACAAACGGCTACTAAATGTCTGGTTACTCCTGGGATCATCATTGATGAAGCTTGATGAAGCTCTCATGCTTTTCCATGACTTCTGA 1554 0.4196 MVTQFGVKLAVHLITNHFGNLVAKVCENLFSHGSLTLDQLIRYSELTKDQVKNSLLVLVQHNCCQAFVSAPEDDDDDVDRLRVRTQYLVLFDNIIHRLRFPKFLETVSRNLDEECVELLDGLLRDGRLTLKQMVDRASQGKENAVDTKVVREILCKLLKARLVERCPAAEPVVSTSFKETTTRKRGAKSAKIFEAPETLEQRVLEAAVPGDAIRFSFTAEMRSNVDRETNSDDDQIISVEENVAKEEEILWRANFEEFVRHLRHKALIENIRTQHDDGTATVLSAVLEATKTVEKKVKMENSVPLSLDTIMAEVMKTDAGRTMTIDRIRASLSQLGCSQRMIVDDAYSIDLKKIIERGRNEEVESIVLKRYGRDAYRMFRLLSKDSCFHDTDQIAASTLVEKKEAPKLLYKLWKDNYLYMEKVVATGVKQTTILMWKVNKPLLWEHVLDEMYHAALNLSLRMAFEQEKDEELLNVPKDKLKEPGPLQKKYKRLLNVWLLLGSSLMKLDEALMLFHDF* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02040 517 FunFam RNA polymerase III subunit RPC82 family protein 254 348 - -
Lapu7g02040 517 Gene3D - 351 439 IPR036388 -
Lapu7g02040 517 FunFam DNA-directed RNA polymerase III subunit rpc3 91 174 - -
Lapu7g02040 517 Gene3D - 91 175 IPR036388 -
Lapu7g02040 517 Pfam RNA polymerase III subunit RPC82 helix-turn-helix domain 8 68 IPR013197 -
Lapu7g02040 517 Gene3D - 2 73 IPR036388 -
Lapu7g02040 517 PANTHER RNA POLYMERASE III DNA DIRECTED -RELATED 4 517 IPR039748 GO:0003697|GO:0005666
Lapu7g02040 517 FunFam RNA polymerase III subunit, putative 352 439 - -
Lapu7g02040 517 FunFam DNA-directed RNA polymerase III subunit RPC3 2 89 - -
Lapu7g02040 517 Pfam RNA polymerase III subunit RPC82 153 329 IPR008806 GO:0003677|GO:0006351
Lapu7g02040 517 Gene3D - 254 348 IPR036388 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02040 K03023 - gmx:100784750 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02040 7 36625688 36641630 Lapu7g02040 7 36625688 36641630 ECH