Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02027 ATGATAGATTTTGTCATTTGTGTGTGTGTGAGAGAAACAGAGTCACAGAGAGAGATGTGGCCATTCAGCAAGAAGGGGGCTTCAGGGTTTTCATCATCATCCACTGCAGAGCAAGTCACTGAAGGTCTTGATGGGACTGGTCTCACTGCCATTGTTACAGGAGCTTCTAGTGGTATTGGCACTGAGACTACACGTGTACTTGCTTTGCGAGGTGTCCATGTGATTATGGGTGTGAGAAATATGATTGCTGCTAAAGATGTCAAAGAAACAATACTTAAAGAGATTCCCTCTGCCAAAGTTGATGCCATGGAGTTAGATCTCAGTTCAATGGATTCTGTCAATAAATTTGCATCAGATTTCAAGGCTTCTGGTCTGCCATTGAACATCTTGATAAACAATGCAGGAATTATGGCATGCCCTTTCAAGATCTCTGTTGACAAAATTGAACTACAGTTTGCCACAAATCACATAGGCCATTTTCTATTGACAAATCTTTTGTTGGACACTATGAAGAAAACTTCGCGTGAAACCAAGAAAGAAGGAAGAATTGTTAATGTCTCCTCTGAGGCTCACCGATTTACGTATTCTAAAGGAATCCGTTTTGACAAAATTAATGATGAGTCAAGTTACAACAACTGGGGTGCATATGGGCAGTCAAAGCTTGCCAACATTTTACATGCAAATGAACTTACAAGACGTCTCAAGGAAGATGGGGTGGATATTTCTGCAAATTCTCTTCATCCTGGAACAATTACCACCAACCTTTTCCGTCATACTCCAGTGAGCGGTATAGTTAGTACTATTGGTAGACTCATGCTTAAAAATGTCCAGCAGGGAGCAGCAACAACATGCTATGTAGCGTTGCACCCACAAGTGAAAGGAATTAGTGGCAAGTATTTTTCAGACAGTAATGTGGCCAAAACAACCTCACATGGGACTGACGCTGATTTGGCCAAGAAACTATGGGATTTCAGCATGAATTTGACCAAGTAA 993 0.4129 MIDFVICVCVRETESQREMWPFSKKGASGFSSSSTAEQVTEGLDGTGLTAIVTGASSGIGTETTRVLALRGVHVIMGVRNMIAAKDVKETILKEIPSAKVDAMELDLSSMDSVNKFASDFKASGLPLNILINNAGIMACPFKISVDKIELQFATNHIGHFLLTNLLLDTMKKTSRETKKEGRIVNVSSEAHRFTYSKGIRFDKINDESSYNNWGAYGQSKLANILHANELTRRLKEDGVDISANSLHPGTITTNLFRHTPVSGIVSTIGRLMLKNVQQGAATTCYVALHPQVKGISGKYFSDSNVAKTTSHGTDADLAKKLWDFSMNLTK* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02027 330 PANTHER RETINOL DEHYDROGENASE 28 330 - -
Lapu7g02027 330 CDD retinol-DH_like_SDR_c_like 47 322 - -
Lapu7g02027 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 47 306 IPR036291 -
Lapu7g02027 330 PRINTS Glucose/ribitol dehydrogenase family signature 125 136 IPR002347 -
Lapu7g02027 330 PRINTS Glucose/ribitol dehydrogenase family signature 175 191 IPR002347 -
Lapu7g02027 330 PRINTS Glucose/ribitol dehydrogenase family signature 239 256 IPR002347 -
Lapu7g02027 330 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Lapu7g02027 330 Gene3D - 39 330 - -
Lapu7g02027 330 Pfam short chain dehydrogenase 49 194 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02027 Lapu-Chr7 36484983 36490744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02027 51 303 Acyl Lipid Metabolism Gene Families AT1G62610 27.941 6.83e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02027 - - gmx:100783465 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02027 7 36484983 36490744 Lapu7g02027 7 36484983 36490744 ECH