Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02016 ATGGATTCAGAATCAGAGATGAGTGGAGGTGTTTCTGGGAAGATGAAGAAGTATTTGCAAATGGGAATATGGTGGTTTTCATTGTTGATCTTTGTTGGCTATGTAATGGTTTGGATTGTGAGGCCTACCAGCATCTTCTTTCTACATTGGTTTCCACACATTGAAGCAAAGGCAGATTCAATATACTTTGGTGAACAAGGGACAACCATACTCATATACACATTTCCAATTCTATTAATTGCCACTTTGGCGGGTGTGTACCTTCATTTGGAGCAAAAACTTTCTAATCATAATACTGAAAGCATGGAGAGATTCTCAGGATTGGCATCATGGAAAAGACCATTGCTTACAAAAGGCCCTCTTGGGATAATCACTGTGACCGAGCTCTCTTTTGCCATCATGTTTGTTTTACTCTTAATTTGGTCCTTCTTCTCCTACTTACATAGCATGTTTGCAAGCGTGGCACAAGAGGCAGCTAAGGAGAGAGACCAAGTGTGGGAAGTCAAGCTAGAATATTCAGCCATTGCTTTAGGCCTTGTTGGGAATATTTGTTTGGCTTTATTGTTCTTTCCAGTTTCAAGAGGGTCTTCAATTTTGAGGTTCATTGGCCTAACTTCAGAGGGAAGCATCAAGTATCATATATGGCTAGGACACACTGCAATGGTTCTCTTCACAGCCCATGGTCTAGGTTATATTATTTTTTGGTACAAGACACACCAAATCTTAGAGATATTCAAATGGAACAAAGTTGGAGTCTCAAATGTGGCTGGAGAAGTTTCTCTGGTTGCTGGATTAATCATGTGGGCTGCTACCTTACCTTCCATAAGGCGAAAAGCTTTTGAGCTTTTCTTCTACACTCATTACCTGTACATTGTCTTTGTAGTCTTCTATGTGCTACATTTGGGATTTTCCTCCTCTTGCATAGTGCTTCCAGGATTTTACCTATTCATGATTGACCGGTACTTGAGATTCCTACAGTCTCAGCAGAAGATTCGGTTGGTTTCTGCCCGAGTTTTGCCTTGTGAAGCTGTTGAATTAAATTTCTCCAAGAACCTAGGATTGTGCTATGCCCCTACAAGCACCATTTTCATTAATGTTCCTAGTATTTCCAAGTTGCAGTGGCACCCTTTTACAATCACCTCCTGCAGTGATACTGATCCTGACACCTTAAGCGTTGTCATCAAAAGTTCAGGAACCTGGTCCAATACTTTATACCAGAAGTTATCATCTTCATCTCCATTATCCCACCTTGATGTCTCCATTGAAGGGCCCTACGGACCAGATTCAACCTTTTACTCGAGGCATGATTTGCTTGTGTTGGTATGCGGAGGAAGTGGCATTACTCCTTTTATTTCCGTAATCCGTTCACTTGTATTTAAGGCCAACACTGAAGGTGGCAAAACTCCTAGAGTTCTTCTTCTATGTGCCTTCAAGAAGTCTATTGATCTCACAATGATAGACCTCATCCTCCCAGTTTCCGCCACCAGCACCACCTTCGATATCTCACGCTTGCAGCTCCAGATTGAAGCCTATGTAACCAGAGAGAAACAGCCAGACATGAATGACAAAAGGCTTACTCAAACATCATGGTTCAAGTCAAATCTATCAGATGAACCAGTTTCTGAAGTTTTAGGAAAAAACAGTTGGCTCTATCTTAGTATTATCATCTCATCCTCCTTTATATTATTCCTTCTACTTATTGGCATCATAACTAGATATTACATATATCCAATTGACCATAATACAGACCTGATATACCCTAATTTCTCAAGGTCTAGTCTAAGCATGTTATTCATATGCACATCTATCGCCATTGTAGCAACATCTGTTTTCCTATGGAACAAGAAACAGAACAAGGATTTGGGGCAGATTAAAAACATTTACACATCAGATCAATCAACTTCTCCGGGTTCAGGATACTACAATGCTGACAAAGAATTAGGGAGTCTTCCCCTCCAATCCTTACTCCAAACAGCTAAAGTACATTATGGAGAAACACCTGACCTAAAAAAAATACTCTCTAGCTGTGATGGATCAAGCATTGGAGTTCTTGTTAGTGGCCCAAGAAAAATGAGACATGAAGTAGCATCAATTTGCACTTCTTGTTCCACAGATGACCTACATTTTGAGTCTGTTAGCTTCAGCTGGTGA 2151 0.4049 MDSESEMSGGVSGKMKKYLQMGIWWFSLLIFVGYVMVWIVRPTSIFFLHWFPHIEAKADSIYFGEQGTTILIYTFPILLIATLAGVYLHLEQKLSNHNTESMERFSGLASWKRPLLTKGPLGIITVTELSFAIMFVLLLIWSFFSYLHSMFASVAQEAAKERDQVWEVKLEYSAIALGLVGNICLALLFFPVSRGSSILRFIGLTSEGSIKYHIWLGHTAMVLFTAHGLGYIIFWYKTHQILEIFKWNKVGVSNVAGEVSLVAGLIMWAATLPSIRRKAFELFFYTHYLYIVFVVFYVLHLGFSSSCIVLPGFYLFMIDRYLRFLQSQQKIRLVSARVLPCEAVELNFSKNLGLCYAPTSTIFINVPSISKLQWHPFTITSCSDTDPDTLSVVIKSSGTWSNTLYQKLSSSSPLSHLDVSIEGPYGPDSTFYSRHDLLVLVCGGSGITPFISVIRSLVFKANTEGGKTPRVLLLCAFKKSIDLTMIDLILPVSATSTTFDISRLQLQIEAYVTREKQPDMNDKRLTQTSWFKSNLSDEPVSEVLGKNSWLYLSIIISSSFILFLLLIGIITRYYIYPIDHNTDLIYPNFSRSSLSMLFICTSIAIVATSVFLWNKKQNKDLGQIKNIYTSDQSTSPGSGYYNADKELGSLPLQSLLQTAKVHYGETPDLKKILSSCDGSSIGVLVSGPRKMRHEVASICTSCSTDDLHFESVSFSW* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02016 716 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 326 431 IPR017927 GO:0016491
Lapu7g02016 716 Pfam Ferric reductase like transmembrane component 177 297 IPR013130 -
Lapu7g02016 716 Pfam Ferric reductase NAD binding domain 435 699 IPR013121 GO:0016491
Lapu7g02016 716 SFLD Ferric reductase subgroup (FRE) 19 716 - -
Lapu7g02016 716 PRINTS Cytochrome B-245 heavy chain signature 417 430 IPR000778 GO:0016020|GO:0016491
Lapu7g02016 716 PRINTS Cytochrome B-245 heavy chain signature 231 251 IPR000778 GO:0016020|GO:0016491
Lapu7g02016 716 PRINTS Cytochrome B-245 heavy chain signature 440 457 IPR000778 GO:0016020|GO:0016491
Lapu7g02016 716 CDD NOX_Duox_like_FAD_NADP 333 514 - -
Lapu7g02016 716 SFLD Ferric Reductase Domain 65 716 - -
Lapu7g02016 716 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 419 492 IPR039261 -
Lapu7g02016 716 PANTHER NADPH OXIDASE 43 714 - -
Lapu7g02016 716 Gene3D - 419 549 IPR039261 -
Lapu7g02016 716 FunFam Ferric reduction oxidase 3 424 543 - -
Lapu7g02016 716 Pfam FAD-binding domain 330 428 IPR013112 GO:0016491
Lapu7g02016 716 SUPERFAMILY Riboflavin synthase domain-like 330 426 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02016 Lapu-Chr7 36375345 36379496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02016 1 716 Miscellaneous Gene Families AT1G01580 50.689 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02016 K00521 - gmx:100779692 1212.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02016 7 36375345 36379496 Lapu7g02016 7 36375345 36379496 ECH