Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01958 ATGTTGAGAATAGGAATCCATAATCACCTGGAAGCGAGGGTATGTTGGGTAGAAGAATGGTTTTTCTTCCGAAGATTCTCTCTGTGGTCGATGAAGAAGGAAGCAGAGTTAGAGTCAGCACTGTCACGCAATCGACGATGGGTGGTGAACAACCAGATAAAGAACATCATCCTCCGGTACCCCAACAACGAAATCCCCATCGAAACCCTCCAGAAGAAGTTCAAAACCCTCGATCTCCAGGGCAAAGCCCTCAACTGGCTCTCTAAGTACCCATGCTGCTTCCAAATCCACGATAACCGCTGCCGCCTCACCAAACGCATGATGAACCTCGTCGCACAGGAACACTCCCTCATCGACTCCCTGCAACCCCTCTTCGCTCGTCGCTTGGCCAAACTCCTCATGCTAACCCTCCGCAACAGACTCACCGTCCTCAAAATCAACGAATTCAAACGCGCCTTCGGCTTCCCCGACGATTACGTAATCAGGATCCTTCCCAACTACCCTAATTTGTTCCGTATCGTCAACGAGAGCGGCAGGAAGAGCTCCATGGCCATTGAGTTGCTGCATTGGGACCCTGACCTCGCAGTCTCCACCGTCGAAGCCTCCGCGCTGAAGCTCGGTACACCGCCGCACTTTTCATGTTCCTTGCCGTCCAGTTGGGTGAAATCCTGGGATAGATTTCGCGAATTTGACGAAATTCCATACATTTCGCCGTATTCGGATCCTAGAGGTTTGGTGGAGGGTTCCAAGGAGATGGAGAAGAGGAACGTTGGTTTGGTGCATGAGTTGTTGTCTTTGACTCTTTGGAAGAAAGCTTCAATTGTGAAGTTGGGGCATTTTAGGAGGGAGTTCCTTTTGCCTGATAGGTTGAATGTGTTGTTGCTCAAGCACCCTGGGATTTTCTATGTTTCCAATAAGTATCAGATTTACACTGTGCTTCTCAGAGAGGCCTATGTCGGGTCTCAGCTTGTGGATAAGGATCCTTTGGTGGTTCTGAAGGAGAATTTTGGGGAGTTGATGCAGGAGGGGCTTCATGAGTACAATCAGAGGCGGCGCCTCCTCAATGTGGAAAAAAGGAGGAAGTTAGGGGTTCCGTTGATTGGTGTAGATGGTGCAAAGGGTAGAAGGAGAAGTCACGAAGTTGATGATGATGATGGTGATGGTAATGGTGGGGATAGTAAGGGGGGAGGGTTGTTTGACCCTGAAGAAAGAAAACGGTTTTATAGAGTTCTTTTTGATGATGATGTTTCTTGA 1254 0.4896 MLRIGIHNHLEARVCWVEEWFFFRRFSLWSMKKEAELESALSRNRRWVVNNQIKNIILRYPNNEIPIETLQKKFKTLDLQGKALNWLSKYPCCFQIHDNRCRLTKRMMNLVAQEHSLIDSLQPLFARRLAKLLMLTLRNRLTVLKINEFKRAFGFPDDYVIRILPNYPNLFRIVNESGRKSSMAIELLHWDPDLAVSTVEASALKLGTPPHFSCSLPSSWVKSWDRFREFDEIPYISPYSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKASIVKLGHFRREFLLPDRLNVLLLKHPGIFYVSNKYQIYTVLLREAYVGSQLVDKDPLVVLKENFGELMQEGLHEYNQRRRLLNVEKRRKLGVPLIGVDGAKGRRRSHEVDDDDGDGNGGDSKGGGLFDPEERKRFYRVLFDDDVS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01958 417 MobiDBLite consensus disorder prediction 373 390 - -
Lapu7g01958 417 Pfam Plant organelle RNA recognition domain 32 343 IPR021099 GO:0003723
Lapu7g01958 417 MobiDBLite consensus disorder prediction 373 400 - -
Lapu7g01958 417 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 27 369 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01958 Lapu-Chr7 35752594 35754691 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01958 - - pvu:PHAVU_007G079300g 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01958 7 35752594 35754691 Lapu7g01958 7 35752594 35754691 ECH