Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01881 ATGAAGATGAGGGTTTCGGTTATTTTAAGTGTTCTGTTGTTGATCCTGTTTCGGCATGGTGAAGCTGAAACATTTTCGGTGGATGGAAAGGTTTTAATTTTGGACGACTCCAACTTCGATTCCGCCATAGCCTCCTTCGATCACATCTTGGTTGACTTTTACGCTCCCTGGTGTGGTCACTGCAAGCGTCTTGCTCCTGAGTTAGATGCGGCTGCGCCTGTACTTGCAACCTTGAACAAACCCATAGTCATTGCAAAAGTAGATGCAGACAAGCATACCCGCCTTGCAAAAAAATATGATGTCCTTGCATATCCAACCATTTTGCTGTTTAATCATGGCGTCCCCACAGAATACCGTGGCCCAAGGAAGGCAGATTTACTTGCTCGATATCTGAAGAAATTTGCTGCTTCTGATGTTTCCATTCTGGATTCAGATTCTGCTGTGAATACGTTTGTCGCAGAAGCTGGCACTTTTTTCCCGATTTTTATAGGTTTTGGTTTGAACAACACGCTAATAGAAAAGTTTGGCATAAAGTACAAGAAAAATGCATGGTTTTCTGTGGCAAAGGATTTTTCAGAGGATCTCATGGTATTGTATGACTTTGATAAGATTCCTGCATTGGTTTCCCTAAATCCACAATACAATGAGCGGAACACATTTTATGGACCCTTTGAAGATGAATTTTTGGAAGATTTTGTTAGACAAAACCTGATTCCTTTGGCTGTGCCTATATCCTACGAAACACTTAAGTTGGTGAAAGCTGATGGTAGGAAAATAGTTTTGACAATTGTTGAGGACGAAGATGAAGAAGGATCAAGAGAACTAACTAAGTTATTGAAGGCTGCTGCATCTGCAAATCGTGACTTAGTATTTGGTTATGTCGGAGTCAAACAAATGGAAGAATTTGCTGAAAATTTTGATATTAGTACTAAACTACCAAAAATGGTCGTTTGGGATAAAAGTGATGATTACCTTTCAGTTGTTGATTCAGAAAGCATTGAGGGGGAGGATCAGGCAACTCAAATCACTAAATTTCTGGAAGGATACAGGGAAGGAAGAACCATAAAGAAAACGTTTAGTGGACCTTCACTAATGCGATACATCCATCGATCCTTTGACATTAGAATGGTGTACATCATTGTTTTTGTTGTGGCAGTACTGATACTTATTCAGAGCTTGAGTAAAGGAGGTGATGAATACCATCCTGTACCAAATCAAGTTCAAGCCGATCATGCAAGCAGTTCTGTTTCAGAAGCTGAAAGCAAAGAGTATATACCAGGTGACAAGGAAGACTAA 1296 0.4005 MKMRVSVILSVLLLILFRHGEAETFSVDGKVLILDDSNFDSAIASFDHILVDFYAPWCGHCKRLAPELDAAAPVLATLNKPIVIAKVDADKHTRLAKKYDVLAYPTILLFNHGVPTEYRGPRKADLLARYLKKFAASDVSILDSDSAVNTFVAEAGTFFPIFIGFGLNNTLIEKFGIKYKKNAWFSVAKDFSEDLMVLYDFDKIPALVSLNPQYNERNTFYGPFEDEFLEDFVRQNLIPLAVPISYETLKLVKADGRKIVLTIVEDEDEEGSRELTKLLKAAASANRDLVFGYVGVKQMEEFAENFDISTKLPKMVVWDKSDDYLSVVDSESIEGEDQATQITKFLEGYREGRTIKKTFSGPSLMRYIHRSFDIRMVYIIVFVVAVLILIQSLSKGGDEYHPVPNQVQADHASSSVSEAESKEYIPGDKED* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01881 431 PRINTS Thioredoxin family signature 100 111 - -
Lapu7g01881 431 PRINTS Thioredoxin family signature 57 66 - -
Lapu7g01881 431 PRINTS Thioredoxin family signature 49 57 - -
Lapu7g01881 431 Pfam Thioredoxin 31 132 IPR013766 -
Lapu7g01881 431 ProSiteProfiles Thioredoxin domain profile. 13 136 IPR013766 -
Lapu7g01881 431 MobiDBLite consensus disorder prediction 401 431 - -
Lapu7g01881 431 SUPERFAMILY Thioredoxin-like 24 134 IPR036249 -
Lapu7g01881 431 Gene3D Glutaredoxin 226 362 - -
Lapu7g01881 431 CDD PDI_a_family 32 131 - -
Lapu7g01881 431 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Lapu7g01881 431 PANTHER PROTEIN DISULFIDE ISOMERASE 7 356 - -
Lapu7g01881 431 Gene3D Glutaredoxin 18 144 - -
Lapu7g01881 431 SUPERFAMILY Thioredoxin-like 236 358 IPR036249 -
Lapu7g01881 431 FunFam Protein disulfide-isomerase 5-2 19 135 - -
Lapu7g01881 431 Pfam Thioredoxin-like domain 191 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01881 Lapu-Chr7 34824245 34829193 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01881 K09580 - gmx:100791778 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01881 7 34824245 34829193 Lapu7g01881 7 34824245 34829193 ECH