Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00857 ATGAAACGCATGGATATCTTCTGTGCGTCCCAAGCCTCAACAGCCATATGTCTCAGCATGGATCAAGCCTCATGCTCCTCTTCCAACACCATTCTACTCGGAGGCCGAGTCATTGACCGCCACAACCCCATTATCAATGACTCAAGAAGGAGCACTTCCAAATCTCTCACTGCCCCGTGTTCCTCCTCTCACTCACCCATCAACCCCAAGCCTTACCATGAGCTCCACAAGGCCAAGAAAAACTCTTCTTCCAAAAGTGCAACCAAGGGTCATGAACATCACAAGAAGAAAAACACAGCAGAAAATATCACTGAACATGTCACCAACACTTCTAAACCGATTGAAAGCATTGTGCGTAGGAGTTTGCTTAAGCCACCTTCTGATTTAATCACTCCTCATGGTTCAACTAGATCTCTGCTCAGTGACTCGGTCTTATTGGATGCTTCTTCACATTATGATCCAGCTTTGGCCTTAACTACTACTTCGGTTAATAACAAAACTTCTCAAGTTGTTCATCAAGATGAAACCATTCCTGTTTCTAAACTTTCTTCCTCTTCTCATCCAAAATCTTGTTCCTCAGACCAGGTTGTGGTATTGAGGGTATCTTTACATTGCAAAGGCTGTGAAGGGAAAGTGAGGAAACACCTCTCCAGAATGGAAGGAGTTACTTCTTTCAACATAGATTTTGCAGCAAAGAAGGTGACAGTTGTTGGGGATGTGACTCCATTGAGTGTCTTGGCTAGCATATCAAAGGTGAAAAATGCACAATTATGGCCAACAACTGCATCAGCAGTGGGATCAGCTACTCTTGAAACAAAGAAATAA 825 0.4352 MKRMDIFCASQASTAICLSMDQASCSSSNTILLGGRVIDRHNPIINDSRRSTSKSLTAPCSSSHSPINPKPYHELHKAKKNSSSKSATKGHEHHKKKNTAENITEHVTNTSKPIESIVRRSLLKPPSDLITPHGSTRSLLSDSVLLDASSHYDPALALTTTSVNNKTSQVVHQDETIPVSKLSSSSHPKSCSSDQVVVLRVSLHCKGCEGKVRKHLSRMEGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQLWPTTASAVGSATLETKK* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00857 274 Gene3D - 192 256 - -
Lapu7g00857 274 PANTHER OS08G0405700 PROTEIN 4 264 IPR044526 -
Lapu7g00857 274 MobiDBLite consensus disorder prediction 43 112 - -
Lapu7g00857 274 Pfam Heavy-metal-associated domain 199 251 IPR006121 GO:0046872
Lapu7g00857 274 CDD HMA 198 251 IPR006121 GO:0046872
Lapu7g00857 274 MobiDBLite consensus disorder prediction 70 102 - -
Lapu7g00857 274 SUPERFAMILY HMA, heavy metal-associated domain 195 252 IPR036163 GO:0046872
Lapu7g00857 274 ProSiteProfiles Heavy-metal-associated domain profile. 194 260 IPR006121 GO:0046872
Lapu7g00857 274 MobiDBLite consensus disorder prediction 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00857 Lapu-Chr7 10285179 10286844 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00857 - - gmx:100813295 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00857 7 10285179 10286844 Lapu7g00857 7 10285179 10286844 ECH
Lapu6g00455 6 4737625 4740018 Lapu7g00857 7 10285179 10286844 PCT