Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00630 ATGGGAGTAGTCACAGTTGGAGAATTAAAGCCTAGCATCTCTGGGAAGAGGACCTTTCGTCCTAGTTCAAGCATAAGGCATGCCACTGAATGGCCGATATCTGATGTCTCTAGTGATCTCACCATTGAAGTAGGAGCTTCAAGCTTTGCACTTCACAAGTTTCCTCTTGTTTCTAGGAGTGGAAGGATTCGGAAAATGCTGTTAGAAGCAAAAGATTCAAAAGTTTCACGGATAAATCTCCCAAACGTGCCAGGTGGTGCAGAGGCATTTGAGCTGGCTGCCAAATTCTGTTATGGAATCAATGTTGAGTTCACCCTCTCCAATGTTGCCATGCTAAAATGTGCAGCTCATTTTCTAGAAATGACAGAAGAGTTCTCAGAGAAAAACTTGGAGACGCGAGCTGAAGCATACCTAAAGGAAACGGTGCTACCAAATATATCAAACACAATATCTGTTCTTCACCGTTGTGAAACTCTTGTCCCCACTTCAGAAGAGATTAGTCTTGTCAGCAGACTAATCAATGCAATTGCAAATAATGCATGCAAAGAACAGCTCACCACTGGTTTACAAAAGCTGGACCACAAATTCCCTTCTAAAACCACCACAAACATGGAACCCGAAACACCCTCAGAATGGTGGGGAAAATCTCTCAATGTTCTTAGTCTTGATTTCTTCCAAAGAGTTTTGTCTGCAGTGAAGTCAAAGGGACTAAAACAAGACATGATCAGCAAAATTTTGATAAACTATGCACATAACTCTCTTCAAGGGATTGTTAGGGACCACCTTGCAGTGAAAGGATGTTTTCCCGACTTAGAATTGCAGAAGAAACAAAGAGTCATTGTTGAAGCCATTTCTGGCTTACTACCAACTCAATCAAGGAAAAGCCCGGTTCCAATGGCTTTTCTCTCAAGCTTGTTGAAGGCTGCAATAGCTGCATCAGCATCCACTTCTTGCAGATCTGATTTGGAGAGAAGGATTGGTCTACAACTTGACCAGGCAATTCTCGAAGACATCCTAATCCCAACAAATTCACATCAAAATACCCATGGCACTATTTATGACACGGATTCAATTTTGAGAATTTTTTCTAATTTTCTGAACTTGGATGAGGAGGACGAAGAGGATAATGGTCACTTGAGAGATGAAAGTGAAATGGTTTATGACTTTGACAGTCCCGGATCCCCAAAACAAAGCTCGATTCTGAAGGTATCCAAATTGATGGACAACTATCTTGCTGAAGTAGCACTAGACCCAAACTTGTTGCCATCAAAGTTCATTTCCCTTGCTGAACTACTTCCAGATCATGCCCGTATTGTCAGTGATGGACTCTATAGAGCTGTTGATATCTTCCTTAAGGTTCATCCAAACATAAAGGATTCAGAGAGATACCGCCTGTGCAAAACCATTGATTGTCAGAAACTGTCTCAAGAAGCGTGCAGCCATGCAGCACAGAATGAAAGGCTACCAGTGCAGATGGCAGTGCAGGTTCTATACTTTGAACAAATCAGGCTTCGCAATGCCATGAACGGAGGGCACAACCAATTTTTTTTTGGAGGACTCAATGGTCAATTCCCTCAACGTTCAGGAAGTGGTGCAGGAAGTGGAGCCATTTCCCCTAGAGACAACTATGCATCAGTGAGAAGGGAGAACCGAGAGCTGAAGCTAGAAGTTGCAAGAATGAGAATGAGGCTCACTGACTTAGAGAAAGACCATGTTAACATGAAGCAGGAGCTAGTAAGGTCTCACCCTGCCAACAAGCTATTCAAATCACTCACCAAAAAGCTAAGCAAGCTCAATGCATTATTTCGGATCAACAGTATTAAGCCAAATGGCTCTGAGAGTCGCTTTCCTTTCCCCAAGAGAAGGCGTCACTCAGTTTCATAA 1884 0.4268 MGVVTVGELKPSISGKRTFRPSSSIRHATEWPISDVSSDLTIEVGASSFALHKFPLVSRSGRIRKMLLEAKDSKVSRINLPNVPGGAEAFELAAKFCYGINVEFTLSNVAMLKCAAHFLEMTEEFSEKNLETRAEAYLKETVLPNISNTISVLHRCETLVPTSEEISLVSRLINAIANNACKEQLTTGLQKLDHKFPSKTTTNMEPETPSEWWGKSLNVLSLDFFQRVLSAVKSKGLKQDMISKILINYAHNSLQGIVRDHLAVKGCFPDLELQKKQRVIVEAISGLLPTQSRKSPVPMAFLSSLLKAAIAASASTSCRSDLERRIGLQLDQAILEDILIPTNSHQNTHGTIYDTDSILRIFSNFLNLDEEDEEDNGHLRDESEMVYDFDSPGSPKQSSILKVSKLMDNYLAEVALDPNLLPSKFISLAELLPDHARIVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQFFFGGLNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVNMKQELVRSHPANKLFKSLTKKLSKLNALFRINSIKPNGSESRFPFPKRRRHSVS* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00630 627 SMART BTB_4 38 130 IPR000210 GO:0005515
Lapu7g00630 627 SUPERFAMILY POZ domain 22 123 IPR011333 -
Lapu7g00630 627 PANTHER OS12G0117600 PROTEIN 34 585 IPR043454 -
Lapu7g00630 627 Gene3D Potassium Channel Kv1.1; Chain A 24 144 IPR011333 -
Lapu7g00630 627 ProSiteProfiles NPH3 domain profile. 211 503 IPR027356 -
Lapu7g00630 627 Pfam BTB/POZ domain 37 137 IPR000210 GO:0005515
Lapu7g00630 627 Coils Coil 543 577 - -
Lapu7g00630 627 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Lapu7g00630 627 FunFam BTB/POZ domain-containing protein At1g03010 16 134 - -
Lapu7g00630 627 Pfam NPH3 family 211 479 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00630 Lapu-Chr7 7228061 7232684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00630 1 453 EF-hand Containing Proteins AT2G47860 60.124 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00630 - - gmx:100814622 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00630 7 7228061 7232684 Lapu7g00630 7 7228061 7232684 ECH
Lapu6g00777 6 8099921 8104209 Lapu7g00630 7 7228061 7232684 PCT