Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00565 ATGGCTTCAATCTTTTCACCTCTCACCACTGTCTTCTTCCTCCTACTCCTCCTTTGGGGTGGCGAGGCACGTGACCCTTTTGCGTGTGACCCAAAGAACGCCGCCACAAGGAGCTTACCCTTTTGCAAGCCGTCGCTGGCAATAGCAGAAAGGGTGAAGGACCTGATTGGAAGGTTGACAGTGGAAGAAAAGGTGAGCTTGCTGGTGAACAATGCTGCGGCAGTTCCACGGCTTGGAATCAAAGGGTATGAGTGGTGGTCGGAGGCACTGCATGGGGTCTCAAATGTGGGCCCCGGAACCAAGTTTGGTGGCCAGTTCCCCGCCGCCACTAGCTTCCCTCAAGTCATCACCACCGCTGCTTCTTTCAATGCTTCTTTGTGGGAAGCTATTGGACGGGTTGCCTCAGACGAAGCAAGAGCAATGTACAACGGAGGAACGGGTGGGCTTACATACTGGAGCCCAAACGTGAACATTTTTAGAGACCCACGGTGGGGCCGCGGACAGGAGACTCCCGGTGAAGACCCAATGCTAGCCGGTAAATATGGTGGCAGTTACGTGAGGGGACTACAGGGGAGCGACGGTAACCGGTTGAAGGTGGCGGCTTCTTGCAAACACTTTACGGCCTATGACCTTGATAATTGGAAGGGTGTGGATCGGTTCCACTTTAATGCAGAGGTTAGCAAGCAGGATATGGAGGACACGTTCAACGTGCCATTCAGGATGTGCGTGAAGGAAGGAAAGGTGGCGAGTGTGATGTGTTCTTACAATCAGGTTAACGGTGTTCCTACCTGTGCCGACCCCATCCTCCTCAACACAACCGTTCGTGGCCTTTGGGGTCTTAATGGCTACATCGTATCAGACTGTGATTCTGTTGGCGTCTTTTACAATTCCCAACATTACACGTCTACGCCAGAACAAGCTGCTGCTGATGCCATTAAAGCAGGTTTGGACTTGGATTGTGGCCCTTTTCTAGCCCAGCATACGCACAATGCCGTCAGAAAAGGCCTGTTAAGCCAAGCTCATGTCAATGGGGCCTTGGCCAACACGTTCACGGTCCAAATGAGGTTAGGGATGTATGATGGTGAGCCATCAGGTCATCCCTATGGCAATCTTGGCCCAACTGATGTGTGCACCCCCAGTCACCAACACCTTGCCCTTGAAGCCGCAAGACAAGGAATTGTTCTACTTAAAAACAAAGGCCCTTCTTTGCCTCTCTCCACAAGGCGTCACCGCACCGTTGCTTTTATTGGGCCCAATTCTAATGTCACTGTCACAATGATTGGAAACTATGCTGGTATTGCTTGTGGATACACAAGCCCTTTACAGGGAATAGGGAAATATACCAAGACGATTCACGAGCTGGGTTGTGCAAACGTGGCTTGTAAAGATGACAGGCAATTCGGGAGAGCCATAAATGCAGCCCAACAAGCAGATGCAACTGTACTAGTGATGGGCCTGGACCAGTCCATTGAGGCTGAAACTGTGGACAGGACTGACCTGCTTCTTCCCGGTCACCAACAAGACCTCGTGTCCAAAGTAGCATCTGCCTCAAAGGGCCCAACAATTTTGGTCATAATGTCTGGTGGGCCTGTGGACATAACTTTCGCAAAGAATGATCCACGAGTCCAAGGAATCTTGTGGGCCGGTTATCCCGGTCAAGCGGGTGGTGCTGCCATTGGTGATATCTTATTTGGAAAGTCTAACCCAGGAGGCAAGCTACCTATGACATGGTACCCACAAGGGTACGTTGAAAAGTTGGCAATGACAAATATGGCAATGCGATCAAGCCGATCAAAAGGGTACCCAGGGAGAAGCTATAGATTTTACAGTGGCCCAGTGGTGTATCCATTTGGTTACGGATTGTCTTACACACATTTTGTTCATACATTGGCAAGTGCACCCAAAGTGGTATCAGTTCCCGTGGATGGGCACCGCCACAAAAATAGCTCCAACACTGCGAACAAGGCAATTAAAGTGACACATGCACGATGTGGCAAGCTTTCCATTAGCCTTCAGGTGGACGTTAAGAATGTTGGGTCCAGAGATGGCACGCACACGTTGTTAGTGTTCTCCGCACCACCTACAGGTAATGGCCACTGGGCTCCACACAAGCAACTTGTGGCCTTCCACAAAGTCCATCTTCCTGCCAAGGCCCAACAGCGACTCCGTATCAACATTCACGTTTGCAAGCTCCTCAGTGTGGTTGACAGGTCCGGGACTAGGAGAATTCCAATGGGCTTCCACACTCTTCACATTGCTGATATTAAACACTCTCTACAACTTCACCCCCAAACACTTGGAATTATCAAGACTTGA 2316 0.5052 MASIFSPLTTVFFLLLLLWGGEARDPFACDPKNAATRSLPFCKPSLAIAERVKDLIGRLTVEEKVSLLVNNAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGQFPAATSFPQVITTAASFNASLWEAIGRVASDEARAMYNGGTGGLTYWSPNVNIFRDPRWGRGQETPGEDPMLAGKYGGSYVRGLQGSDGNRLKVAASCKHFTAYDLDNWKGVDRFHFNAEVSKQDMEDTFNVPFRMCVKEGKVASVMCSYNQVNGVPTCADPILLNTTVRGLWGLNGYIVSDCDSVGVFYNSQHYTSTPEQAAADAIKAGLDLDCGPFLAQHTHNAVRKGLLSQAHVNGALANTFTVQMRLGMYDGEPSGHPYGNLGPTDVCTPSHQHLALEAARQGIVLLKNKGPSLPLSTRRHRTVAFIGPNSNVTVTMIGNYAGIACGYTSPLQGIGKYTKTIHELGCANVACKDDRQFGRAINAAQQADATVLVMGLDQSIEAETVDRTDLLLPGHQQDLVSKVASASKGPTILVIMSGGPVDITFAKNDPRVQGILWAGYPGQAGGAAIGDILFGKSNPGGKLPMTWYPQGYVEKLAMTNMAMRSSRSKGYPGRSYRFYSGPVVYPFGYGLSYTHFVHTLASAPKVVSVPVDGHRHKNSSNTANKAIKVTHARCGKLSISLQVDVKNVGSRDGTHTLLVFSAPPTGNGHWAPHKQLVAFHKVHLPAKAQQRLRINIHVCKLLSVVDRSGTRRIPMGFHTLHIADIKHSLQLHPQTLGIIKT* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00565 771 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 393 626 IPR036881 GO:0004553|GO:0005975
Lapu7g00565 771 FunFam probable beta-D-xylosidase 7 51 365 - -
Lapu7g00565 771 SUPERFAMILY (Trans)glycosidases 39 392 IPR017853 -
Lapu7g00565 771 SMART Fn3_like_2 685 756 IPR026891 -
Lapu7g00565 771 Gene3D Immunoglobulins 647 767 IPR013783 -
Lapu7g00565 771 Pfam Glycosyl hydrolase family 3 N terminal domain 105 347 IPR001764 GO:0004553|GO:0005975
Lapu7g00565 771 FunFam probable beta-D-xylosidase 2 378 624 - -
Lapu7g00565 771 Pfam Glycosyl hydrolase family 3 C-terminal domain 393 623 IPR002772 GO:0004553|GO:0005975
Lapu7g00565 771 Gene3D - 379 624 IPR036881 GO:0004553|GO:0005975
Lapu7g00565 771 Pfam Fibronectin type III-like domain 687 753 IPR026891 -
Lapu7g00565 771 PRINTS Glycosyl hydrolase family 3 signature 199 215 IPR001764 GO:0004553|GO:0005975
Lapu7g00565 771 PRINTS Glycosyl hydrolase family 3 signature 273 291 IPR001764 GO:0004553|GO:0005975
Lapu7g00565 771 PRINTS Glycosyl hydrolase family 3 signature 112 131 IPR001764 GO:0004553|GO:0005975
Lapu7g00565 771 Gene3D - 51 365 IPR036962 GO:0004553|GO:0005975
Lapu7g00565 771 PANTHER SUGAR HYDROLASE-RELATED 23 758 IPR044993 GO:0009044|GO:0045493
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00565 Lapu-Chr7 6398976 6403816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00565 23 771 Glycoside Hydrolase AT1G02640 71.429 0.0 1136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00565 - - gmx:100798630 1412.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00565 7 6398976 6403816 Lapu7g00565 7 6398976 6403816 ECH
Lapu6g00855 6 8758151 8763929 Lapu7g00565 7 6398976 6403816 PCT