Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00557 ATGGCAACAGTAGCTGGTGGTGTGAGTCTCTCAAGCCCAAACAGAGTATTCGCTAATGCCAAGGGATCAGACTCAGCGCAAAAGGCCCACGCAATTAGGTTCCCGCTCTTCAGGCCCGTACATAAGTGGCCCGGTTTGGTTGGGGTGGCCAAGGCCCGGCCCATTCGCGCAACGCCGGAGAAGATATCGGAGAAGGTGGAGGAGAGCATAAAGAGCGCGGAGGAGGCCTGCTCAGGAGGCGGGGATGACGCGGAATGCGCGGCGGCGTGGGATGAGGTGGAGGAGCTCAGCGCGGCGGCGAGCCACGCCAGAGAGAAGCAGAAGCAGTCTGACCCGCTGGAGAACTACTGCAAGGAAAACCCGGAGACCGATGAGTGTCGCACTTACGATAATTAA 396 0.5934 MATVAGGVSLSSPNRVFANAKGSDSAQKAHAIRFPLFRPVHKWPGLVGVAKARPIRATPEKISEKVEESIKSAEEACSGGGDDAECAAAWDEVEELSAAASHAREKQKQSDPLENYCKENPETDECRTYDN* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00557 131 SMART CP12_2 62 131 IPR003823 -
Lapu7g00557 131 MobiDBLite consensus disorder prediction 97 131 - -
Lapu7g00557 131 Pfam CP12 domain 62 130 - -
Lapu7g00557 131 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 8 131 IPR039314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00557 Lapu-Chr7 6301542 6301937 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00557 - - gmx:100814289 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00863 6 8848618 8849019 Lapu7g00557 7 6301542 6301937 PCT