Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00252 ATGGCGACTTTGTCTCACGCAAACTCAAGGAGAATGTATTCATGGTGGTGGGACAGCCACATAAGCCCCAAAAACTCAAAATGGCTCCAGGAGAATCTGACAGATATGGATGCCAAGGTGAAGCAAATGATTAAGCTTATTGAAGAAGATGCAGATTCTTTTGCCAGGAGAGCAGAAATGTATTATAAAAAACGCCCAGAGCTTATGAAATTGGTTGAAGAGTTTTACAGGGCATATCGGGCATTAGCTGAGAGATATGATCATGCAACAGGAGTGATCCGCCATGCCCATAGGACCATGGCTGAGGCATTTCCTAATCAAGTTCCTATGATGCTGACAGATGATTTACCTACTGTTTCTCCTCCAGAGACAGAGCCACACACTCCAGAAATGCGCCACCCTTCACGTGCGTTTCTTGATCCAGATGAACCACAAAAGGAGGCTTCTGCTCACTTCCATGTTATAAAAAAAAATGGTGGTTATTCTGGCGAACCTGATTCTTCTTTGAGCAAAACAGGTTTGAAACAGCTCAATGATCTCTACATCCCCGGAGAACAGGAAAATCTTACACAGTTTGCAGAAAGGAATGCTAGAAGGGGGCTCAATTTTTTCGAGACCCAGGAGAGTAGTGAGCTAAACAATGGAAGCAACAATACTAGGTCACAAGTCTCGTCTGAGTCTGAACGTTTGACAAAAGCTGAGACAGAAATTTTGGCCTTGAAGAAAGCCATTGCCAAATTAGAAGATGAAAAGGAAGTTGGCTTGCTTCAGTATCAACAGTGTTTAGAGAAGTTGTCTAATCTCCAGTTAGAAGTGTCTAGTGCACAAGAGAATTCTCAAAGACTTGATGAGAGAGCAAGTAAAGCTGAAGCTGAAGTTCAAACCTTGAAGGAAACCCAAATTAAATTACAGGCTGAAAGTGAAGATAGTCTTATTCAGTATCAGGAGTGCTTGGAGAAAATAGCAAAGCTAGAGGAAAATATTTCTTTTACGCAGACAGAAGCAGGAGAACTTAATGAAAGAGCTACCAGAGCTGAAAATGAAGCTGAGTCCCTAAAGCAGGACCTTGCTAGAGTAGAAGCTGAAAAGGAAGCTATCATTGTTCAATATAAACGGTGCTCAGAGACATTATCAGAATTGGAGGAGAGATTAGAAGAAGCCAAGGAAAACGCAAGAAGGACTAAGGAGCATGCCAATATAGCTGAAAATGAAATCGGGGCTTTGAAACTAGAAGTTACTAAACTTAATGAAGTAAAGGAAGAAGCTGCTCTCCGTTATCAGCAATGCATGGAGATAATTTCCAGTCTGGAGTATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAGGCTAAATTCCAAGATAGATGATGGGGTTGAAAAATTACACAGTTCTGAACAGAAGTGTCTTCTCTTGGAGACATCAAATCACACTCTGCAGTCTGAATTACAATCTTTGGCACAACAAATGGGGTCTCAAAGTGAAGAACTTAATGAGAAGCAGAAGGAATTGAGTAGACTTTGGGGTTGCATACAGGAGGAGAGATTGCGCTTCATTGAGGCTGAAACTGCTTTCCAAACTCTTCAGCAGTTACATTCTCAATCTCAGGAAGAACTTAGATCTCTTGCTGCTGAACTTCACAGTAAAGTGGATATACTGGGGAATGTGGAATCACGTAAGCAGGCTTTAGAGGACGAAATACACAGGGTCAGTGAGGAAAACAAAATTCTAAATGAGGTTAAAATTTCTTCATCTTTGTCAATAAAAAATTTGCAGGATGAGATTTTTAATTTGAGGGAGACAATAGAAAAACTTGAACAGGAAGTGGAGCTGCGAATTGACGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAGAGAGGAGCTTAACGATTTGAATAAAAAACATGAAGCCATGTTGGAGGAGGTCAGGTCAACTGACTTAGATCCAGAGTGCTTTGGACCATCTGTGAAAAAATTGCAAGATGAAAACTTAAAGCTCAAGGAAACATGTGAGGCTGACAAAGGAGAGAAAGAAGCTCTTTTGGTAAAATTGGAAATGATGGAGAAACTTCTGGAGAAAAATACTGTTTTGGAAAATTCCCTTTCAGACTTGAATGCTGAGCTGGACAGTGTCAGAGGAAAGGTAAATGTGTTGGAAGAAACATGCCAATCTCTACTAGTGGAGAAATCCAATCTTGCTGCTGAGAAGGCCACCTTGTTTTCTCAGTTACAATCCACAACTGAAAAGCTGGAGAAGCTCTCAGAAAAGAGCAACCTGTTGGAAAATTCATTATTTGATGTGAATGCTGAACTTGAAGGGTTAAGGATGAAGTCCAGGGTATTAGAAGACACATGCCAGTCACTTGACCATGAGAAGTCCAGTATCTTTCAAGAGAAAGAAACCTTAGTTTCACAGATGAACATAACTCATCAAATACTGAAAGATCTTGAGAAACTGCACGGTGAATTGGAGACAAAGCATTTGGAACTAAAAGGAGAAAGGGAGTCTGCACTTCAAAAGGTAGAAGAGCTTCTAGTTTCCCTATATTCTGAGAGGGAAGAGCATTCCAGAGTTTTGAAATTGAATGAAGATGAATTGGCCGAGAAGGAATTACAAATTCATATTCTACAAGAAGATGCCAATTGCAAGAAAAAGGAACACGAGGAGGAACTGGACAGAGCTATGCATGCTCAAATTGAAATTTTCATCTTGCAGCAATGTATTGACGAGCTGGAAAAAAAGAACTTCTCCATTCTGGTTGAGTGTCAGAGACTTTTTGAGGCTTCCAAAATGTCTGACAGAATGATATCTAAATTAGAGACTGAAAATGTTGAAAAGCAGGTGGGTGTGAATTCTCTGTCTGAGAAAATTAAAATACTAAGGATTGGGTTGATTCAGGCGTTGAAGACTCTTGACAACAACAGTGGGCATTTCTGTGAAGATAGGCTCGAAGAAGACCAAATGCTTCTGAACCTCATATATGAAAAACTTCAGGAGAGGCAGAAATCTTTTGACACAGTTTTCAATGAAGGCCAAAAAATGGCCATTGAGAATTCAATTCTGATTACATTCCTTGAGCAGTTGAAATTAAAGGTAGAAAATCTTGTGACACAGAGAGATGCCCTTGATGAGCAGTTCAGTATCCAGTCTCAGCAGTTCTTGGCATTGCAAATAGAGGTCCAAAAGATACTGGAGAAGAACCAAGAGTTGAAGTTGACAATAAGCAAAGGAGAAGAGAGAATGGAAGTAATGACAACTGAAATAGGCAACCTACAGAAGAAGCTGTCAGACATGGAAAAGAATCACAACAATTTACAGGAGGATAGTTGCAAAATATTGGAAGAGAAGAAATCCTTGATGAGAAGTTTTCTAGATCTGGGTGAAGTGAAAAGTAACTTGGAAGAAGAAATATGTTTCATGATCCATGAGACAATAGCCCAGTCTAATATTTCCCTGATTTATGAGAACGTTATCTTTGAAAAGCTCCTGGAACTTAAAGAGCTAGGTGAGGATCTTGATAAACATTGTTCAGCAAATAATGAGCTCGAGGAGAGATTAAAAGTTATGGTGGGAAAGATAGAGAATGCAGAAATGGAAAATTCACATCTTAAAGAGTCATTTGTAAAGTCAAATGTTGAACTGCATTTAGTTGAATCTATCAATGATGAATTAAGTTGTCAGATTAGGGATGAAAGGGAAATGTTGAATCAGAAGGAAAATGAGCTTTTGGAAGCAGCTGAGATGTTTCGTGTTTTACATACTGAGAAAACAGAATTGCAAAGAATGGTGGAAGATCTGAAGATTAAATATGATGAAGCAAGGGTGATGCTCGAAGAACAGGCTAATCAAATTTTGAAATTGTCCTCAGACAAGGACCATCAAAGTGAAGAGCTAATAAGCCTGTGTGAAGTGAACCAGAAATTGGAGTCTGAAATGGGGTACCTACGTCAAGAGCTTGGAGAAACTAAACTGAGGGAAAAGAAGCTAAGTTATGAAGTACTTAAGGGAACGAATGAGATTGAACAATGGGAAACTCAGGCTTCAGCACTCTTTGCTGAGCTGCAGATTTCTGCTGTCAATGGAACATTATTTGAAGGAAAGGTGTATGAGCTAGCTGATGCTTGTGAGAATCTTGAACACAGAAACTACTCCAAAGATATGGAAAGCAAGCATCTGAAAGAAAGAGTTGGCAAGCTAGAAATTGAAAATGAAAGACTATCTGGTCAATTGGCTGCATATGTCCCTGCCGTCAGAGCTTTGAATGATTGTGTAACAACTCTGGAGATGCAGACTCTTGCACATGCAAAACCTGATGACTGTGAAGAAACAAAGGTTAAAAGTTTAGTGAGTAATGAATTCACTGAAAATGGTCAACAAGGCGATGAAATTAAGACTGTTATGGCACCAGATGCACTCCCTGACTTCCAAGACATGCAGAGAAGGATCAATGCCATTGCAATAGCAGTAAAGCAGTTAAATGAAAGTAACAAACTCAAGAATGAAACGAGAGAGATTCAAGAGTTAAAATCTAGAATTATCAGACATGAAGAGAATATTCAAGCAAGAAGGCATGTTACTCAAGACCAAGCAAAGTCAGATATCCCGGTTACCGAGATTGAAGTTTTGCCAAAAGACATCATGCTAGATCAAATATCTGAATGTTCATCGTATGGGATAAGTAGGAGGAGAGAAATTCTTGAGGCTGACGATCAAATGCTTGAATTGTGGGAAACTGAAGATAAGGATGGCACTATTGTAAAGCAAGTTGAAAAGACACAGAGGATGGGTTCTGAAGCTGCTGGCAATCATCAAAGAGGAACAACCAAGGAACCCAAAAATAAATATCCTTCAAAAGATTTCTTGGTGGAAAAAGATTTGAGTGTGGACAAGTTAGAGATCTCAAGAAGATTGACACTGCCTCGGGAAGAAGGGAACCATACGAAGATTTTAGAGAGACTTGATTCTGATGCACAGAAGTTGACAAACCTTCAAATTACCATACTAGATTTGAAGAAGAAGGTAGAGGTTAATGAGAAGAACACAAAGGGAAAAGGTCTTGAGTTTGATGAGGTGAAAGGGCAGCTTGAAGCATCCCAGGAGACCATCACAAAGTTGTTTGACGCCAACCGGAAGTTGATGAAGAATGTGGAAGAGGGTACCTTGTCTTCTGTCGGGCAGAGGGCATCAGAGTCAGATGAAAGCGGAAGTGTCAGCAGAAGGAGAGTCTCAGACCAGGCACGGAGAGAATCAGAAAAGATAGGACAACTACATTTGGAGGTGCAAAGACTGCAGTTTCTGCTGCTGAAACTTGGTGATGAAAAAGAAAGCAAAGAGAAAACAAAAACAACTGATCGAAGTCCAAGAGTGCTTTTGCGAGATTATCTCTATGGTGGGATGAGAACCAACAACCAAAAGAAGAAAAAGCTACCTTTTTGTTCATGTGTGCGACCCCCCACCAAGGGAGATTGA 5472 0.3997 MATLSHANSRRMYSWWWDSHISPKNSKWLQENLTDMDAKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRHAHRTMAEAFPNQVPMMLTDDLPTVSPPETEPHTPEMRHPSRAFLDPDEPQKEASAHFHVIKKNGGYSGEPDSSLSKTGLKQLNDLYIPGEQENLTQFAERNARRGLNFFETQESSELNNGSNNTRSQVSSESERLTKAETEILALKKAIAKLEDEKEVGLLQYQQCLEKLSNLQLEVSSAQENSQRLDERASKAEAEVQTLKETQIKLQAESEDSLIQYQECLEKIAKLEENISFTQTEAGELNERATRAENEAESLKQDLARVEAEKEAIIVQYKRCSETLSELEERLEEAKENARRTKEHANIAENEIGALKLEVTKLNEVKEEAALRYQQCMEIISSLEYKLSCAEEEVRRLNSKIDDGVEKLHSSEQKCLLLETSNHTLQSELQSLAQQMGSQSEELNEKQKELSRLWGCIQEERLRFIEAETAFQTLQQLHSQSQEELRSLAAELHSKVDILGNVESRKQALEDEIHRVSEENKILNEVKISSSLSIKNLQDEIFNLRETIEKLEQEVELRIDERNALQQEIYCLREELNDLNKKHEAMLEEVRSTDLDPECFGPSVKKLQDENLKLKETCEADKGEKEALLVKLEMMEKLLEKNTVLENSLSDLNAELDSVRGKVNVLEETCQSLLVEKSNLAAEKATLFSQLQSTTEKLEKLSEKSNLLENSLFDVNAELEGLRMKSRVLEDTCQSLDHEKSSIFQEKETLVSQMNITHQILKDLEKLHGELETKHLELKGERESALQKVEELLVSLYSEREEHSRVLKLNEDELAEKELQIHILQEDANCKKKEHEEELDRAMHAQIEIFILQQCIDELEKKNFSILVECQRLFEASKMSDRMISKLETENVEKQVGVNSLSEKIKILRIGLIQALKTLDNNSGHFCEDRLEEDQMLLNLIYEKLQERQKSFDTVFNEGQKMAIENSILITFLEQLKLKVENLVTQRDALDEQFSIQSQQFLALQIEVQKILEKNQELKLTISKGEERMEVMTTEIGNLQKKLSDMEKNHNNLQEDSCKILEEKKSLMRSFLDLGEVKSNLEEEICFMIHETIAQSNISLIYENVIFEKLLELKELGEDLDKHCSANNELEERLKVMVGKIENAEMENSHLKESFVKSNVELHLVESINDELSCQIRDEREMLNQKENELLEAAEMFRVLHTEKTELQRMVEDLKIKYDEARVMLEEQANQILKLSSDKDHQSEELISLCEVNQKLESEMGYLRQELGETKLREKKLSYEVLKGTNEIEQWETQASALFAELQISAVNGTLFEGKVYELADACENLEHRNYSKDMESKHLKERVGKLEIENERLSGQLAAYVPAVRALNDCVTTLEMQTLAHAKPDDCEETKVKSLVSNEFTENGQQGDEIKTVMAPDALPDFQDMQRRINAIAIAVKQLNESNKLKNETREIQELKSRIIRHEENIQARRHVTQDQAKSDIPVTEIEVLPKDIMLDQISECSSYGISRRREILEADDQMLELWETEDKDGTIVKQVEKTQRMGSEAAGNHQRGTTKEPKNKYPSKDFLVEKDLSVDKLEISRRLTLPREEGNHTKILERLDSDAQKLTNLQITILDLKKKVEVNEKNTKGKGLEFDEVKGQLEASQETITKLFDANRKLMKNVEEGTLSSVGQRASESDESGSVSRRRVSDQARRESEKIGQLHLEVQRLQFLLLKLGDEKESKEKTKTTDRSPRVLLRDYLYGGMRTNNQKKKKLPFCSCVRPPTKGD* 1824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00252 1823 Coils Coil 1166 1200 - -
Lapu7g00252 1823 Gene3D - 681 862 - -
Lapu7g00252 1823 Coils Coil 1492 1519 - -
Lapu7g00252 1823 Coils Coil 524 544 - -
Lapu7g00252 1823 MobiDBLite consensus disorder prediction 1593 1616 - -
Lapu7g00252 1823 PANTHER PROTEIN NETWORKED 4A 284 385 - -
Lapu7g00252 1823 Coils Coil 552 579 - -
Lapu7g00252 1823 Coils Coil 657 677 - -
Lapu7g00252 1823 Coils Coil 433 460 - -
Lapu7g00252 1823 Coils Coil 1061 1109 - -
Lapu7g00252 1823 Coils Coil 814 834 - -
Lapu7g00252 1823 MobiDBLite consensus disorder prediction 206 229 - -
Lapu7g00252 1823 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Lapu7g00252 1823 MobiDBLite consensus disorder prediction 1734 1752 - -
Lapu7g00252 1823 Coils Coil 1026 1046 - -
Lapu7g00252 1823 Coils Coil 587 646 - -
Lapu7g00252 1823 SUPERFAMILY Tropomyosin 421 646 - -
Lapu7g00252 1823 Coils Coil 1222 1249 - -
Lapu7g00252 1823 Coils Coil 230 250 - -
Lapu7g00252 1823 Coils Coil 853 898 - -
Lapu7g00252 1823 MobiDBLite consensus disorder prediction 126 148 - -
Lapu7g00252 1823 MobiDBLite consensus disorder prediction 1721 1752 - -
Lapu7g00252 1823 Coils Coil 258 418 - -
Lapu7g00252 1823 Coils Coil 1257 1284 - -
Lapu7g00252 1823 Coils Coil 1390 1410 - -
Lapu7g00252 1823 MobiDBLite consensus disorder prediction 118 148 - -
Lapu7g00252 1823 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Lapu7g00252 1823 Coils Coil 688 771 - -
Lapu7g00252 1823 MobiDBLite consensus disorder prediction 206 226 - -
Lapu7g00252 1823 Coils Coil 475 502 - -
Lapu7g00252 1823 SUPERFAMILY Tropomyosin 217 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00252 Lapu-Chr7 2903775 2911464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00252 - - gmx:100810726 2350.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00252 7 2903775 2911464 Lapu7g00252 7 2903775 2911464 ECH
Lapu1g02132 1 35448566 35455929 Lapu7g00252 7 2903775 2911464 PCT