Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00235 ATGGAGCTCAGTCAAGTCACCCTAGAGATCTTCTCCAAACTGGAACACAAATGGCTCTCACATTGTAAACCCAACAACAAAACCCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCGCCGGAGAAGCTCTCATCCACCTCGAGGATCAGATCCGTCTCCGCACCTCCGATCCCCATGCTCAGGTCGCCGATTTCTTCGACATCGTCGCTGGCACCGGCATTGGTGCCATCCTCGCCGCCATGATCACCGCCGGCGACTCTTTCGGCAGGCCTCTCTACACCGCCAGAGAAGCCGTTCGTCTCGTCTCCGAGAGAAACTCCGAGCTCTATAAGTTCAAATCCGGAGGCGTATTCCGCCGGCGCCGGAAATTCTCCTCCAGAAGCATGGATAACGTGTTGAAGCAAGTGTTTCAGAGGAAGGAAGACGGACGGTTGTTGACCTTGAAGGACACGTGTAAACCGCTGCTTATCCCTTGCTTCGACCTCAAGAGTTCCGCGCCGTTCGTCTTTTCGCGCGCCGACGCATCCGAGTCTCCGAGCTTCGACTTCGAGCTCTGGAAGGTGTGTCGCGCCACGTCAGCGACGCCAAGCCATTTCAAGCCGTTCGACTTCACTTCCGTCGACGGGAAGACCTTGTGCTCCGCCGTGGACGGCGGCCTAGTGATGAACAACCCTACGGCAGCGGCGGTGACGCACGTTCTCCACAACAAGCACGATTTCCCGTCGGTGAGCGGCGTGGAGGATCTCCTAGTCCTTTCCTTGGGGAACGGATCGTGGAACACCAAAGCGTGCGAGAATCGCACGTGCTCTACACCGTCGGTGGTTGACATTGTGCTGGACGGCGTTTCCGAGACCATTGACCAGATGTTAGGGAACGCCTTCTGCTGGAATCGTACGGACTACATCAGAATCCAGGCCTTCGGTTTGGGAAGCGAAGCAATGAGGAAGGAGGAGGTGCTCAAAGAGAGAGGACTGGAGTCGTTACCCTTTGGCGGGAAGCGGTTACTCACGGAGACTAACGGGAACAGAATTGATAGCTTCGTGCAACGTCTTGTTGCAACCGGAAAACCAAGCCCGCCGTCTACTCCGTGCAAGGATTCCGCCGTCAACCCTCTCGCTAACGGCCGCAAGTTTTTCATTTCTTGA 1155 0.5636 MELSQVTLEIFSKLEHKWLSHCKPNNKTRILSIDGGGTTAIVAGEALIHLEDQIRLRTSDPHAQVADFFDIVAGTGIGAILAAMITAGDSFGRPLYTAREAVRLVSERNSELYKFKSGGVFRRRRKFSSRSMDNVLKQVFQRKEDGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFDFELWKVCRATSATPSHFKPFDFTSVDGKTLCSAVDGGLVMNNPTAAAVTHVLHNKHDFPSVSGVEDLLVLSLGNGSWNTKACENRTCSTPSVVDIVLDGVSETIDQMLGNAFCWNRTDYIRIQAFGLGSEAMRKEEVLKERGLESLPFGGKRLLTETNGNRIDSFVQRLVATGKPSPPSTPCKDSAVNPLANGRKFFIS* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00235 384 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Lapu7g00235 384 PANTHER PATATIN-LIKE PROTEIN 6 2 368 - -
Lapu7g00235 384 SUPERFAMILY FabD/lysophospholipase-like 26 310 IPR016035 -
Lapu7g00235 384 Gene3D Cytosolic phospholipase A2 catalytic domain 16 360 - -
Lapu7g00235 384 CDD Pat17_PNPLA8_PNPLA9_like 30 309 - -
Lapu7g00235 384 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00235 Lapu-Chr7 2654709 2656485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00235 1 379 Acyl Lipid Metabolism Gene Families AT3G63200 70.649 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00235 - - gmx:100777557 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00235 7 2654709 2656485 Lapu7g00235 7 2654709 2656485 ECH
Lapu1g02154 1 35805960 35807950 Lapu7g00235 7 2654709 2656485 PCT