Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g03066 ATGGGAAAGTTTGCCCTAGCCAATGTTCTCTTGTTCCTTCTCCTCAACTTGAGCACCTTGCTCACTGTTCTTGCCTGTCCTTACTGCCCTTACCCCTCTCCTAAGCCTCCCAAACACCCTCCCATAGTGAAGCCACCAGTTCACAAACCACCCAAACCATGCCCTCCACCCCACTCATCTCCCAAACCTCCACATGTGAAGCCACCCCATGTTCCAAAACCCCCTCACTACCCTAAGCCACCAGTTCAACCACACCCCCCCTATGTCCCAAAACCTCACCCTAAGCCACCAGTTCATCCCCACCCACCCTATGTCCCAAAACCACCACATCTCCCAAAACCACCCGTTGTCACGCCACCTTACATCCCTAAACCTCCTGTTGTCACACCCCCCTACATCCCTAAACCACCACCAGTTGTCCCAGTCACACCTCCTTACATCCCTAAACCACCGGTTGTCCCAGTTACACCTCCTTACATCCCCAAACCACCTGTTGTGACACCACCTTACATCCCTAAACCACCCGTTACGTATCCTCCTCCGGTCCCTTCGCCACCAGTTCGACCACCCGTTCTGACCCCACCAAGCCCTCCAAGTGAAACACCGTGTCCTCCACCGCCACCACCACCAACACCAGTGGTGCCATACCCTCCGCCAGCACAACCAACATGCCCCATTGACTCCTTGAAACTGGGAGCGTGTGTGGATGTGCTTGGTGGCCTCATCCACATAGGTATTGGAAGCAGTGCTAAACAGACGTGTTGTCCAGTTCTTGCAGGGCTTGTGGACTTGGATGCTGCAGTGTGCCTCTGCACAACCATCAGGGCCAAGGTCCTTAACATCAACATCATAATCCCAATTGCTCTTCAGCTCCTCATTGACTGTGGCAAGACCCCACCAGATGGATTCAAGTGTGCAGATAGTTAG 927 0.5383 MGKFALANVLLFLLLNLSTLLTVLACPYCPYPSPKPPKHPPIVKPPVHKPPKPCPPPHSSPKPPHVKPPHVPKPPHYPKPPVQPHPPYVPKPHPKPPVHPHPPYVPKPPHLPKPPVVTPPYIPKPPVVTPPYIPKPPPVVPVTPPYIPKPPVVPVTPPYIPKPPVVTPPYIPKPPVTYPPPVPSPPVRPPVLTPPSPPSETPCPPPPPPPTPVVPYPPPAQPTCPIDSLKLGACVDVLGGLIHIGIGSSAKQTCCPVLAGLVDLDAAVCLCTTIRAKVLNINIIIPIALQLLIDCGKTPPDGFKCADS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g03066 308 CDD HPS_like 222 305 IPR027923 -
Lapu6g03066 308 PANTHER - 9 305 - -
Lapu6g03066 308 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 226 306 IPR036312 -
Lapu6g03066 308 MobiDBLite consensus disorder prediction 40 105 - -
Lapu6g03066 308 Gene3D - 221 307 IPR036312 -
Lapu6g03066 308 PRINTS Proline rich extensin signature 25 46 - -
Lapu6g03066 308 PRINTS Proline rich extensin signature 87 112 - -
Lapu6g03066 308 PRINTS Proline rich extensin signature 68 85 - -
Lapu6g03066 308 PRINTS Proline rich extensin signature 49 65 - -
Lapu6g03066 308 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Lapu6g03066 308 Pfam Hydrophobic seed protein 223 306 IPR027923 -
Lapu6g03066 308 MobiDBLite consensus disorder prediction 185 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g03066 Lapu-Chr6 41778869 41779922 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g03066 217 305 Acyl Lipid Metabolism Gene Families AT4G22520 35.870 2.72e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g03066 - - gmx:100792715 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g03066 6 41778869 41779922 Lapu6g03066 6 41778869 41779922 ECH