Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g03065 ATGGATTCAACACCTCACATTCTTAGAGTCACCATTGCAATTCTTTGCTTCTCAGTGCTAGCTTCCACTCTTTTTCCTATGTGTGATGCTATGTACCATGGAAGAGCTATAAGGGGTCACAGAATCCACAAAAGAAGCACCCTCATCAGATCCTGGAAGAAGCTGAAAATAAAATCTCTAAAACGTTTGAGCAAGTATTCATCATTTGATTCATTTGGGTTCTCAGATTTTGACTCCTATGGCTCCCCTTCTTCCCTACCCTTGCCACCTTACAATTCACTTCCACCATCAACTTCCATTGCACCTGCATTGCCACCTCCAACCATAGGTGGCATTGGGAGCCCTAATCTCCCAGCAATTTCACCTCTTCCAAGCCCACCTTCTCACGGGCCCCCAAGCCCAAGAAGCATTGTTGCTTCACCACCACCACCACTATCACCCCCTTATTCTTCTTCAAGCCCACCAAAGCACTCCCCAAGCCCACCAAAGCACTCCCCAAGCCCACCAAAGAGTGTTCCAAGTCCAGGCTCACCACCGCTGGTGTACCTGCCACCCGTGGTGTTCCCACCTCCCCCTTCACCCTCCAGGCACCGGAAAAAGCCCCCACAGTACGCGCTTTGGTGTGTGGCAAAGCCCACGGTTCCAGACCCGATCATTCAGGAGGCCATGGACTATGCCTGTGGGTCTGGAGCAGACTGCAAATCAATTCAGCCCAATGGGCTCTGCTTCCAACCCAACACTCTGCTGTCCCATGCTTCCTTTGCCTTCAATAGTTACTGGCAGAACACTAAGATTGGTGGAGGCACTTGTGATTTTGGTGGAACTGCCATGCTCGTCACTGTCGATCCAAGCTATGACAAATGCAACTTCATGTTGACTTAG 882 0.5023 MDSTPHILRVTIAILCFSVLASTLFPMCDAMYHGRAIRGHRIHKRSTLIRSWKKLKIKSLKRLSKYSSFDSFGFSDFDSYGSPSSLPLPPYNSLPPSTSIAPALPPPTIGGIGSPNLPAISPLPSPPSHGPPSPRSIVASPPPPLSPPYSSSSPPKHSPSPPKHSPSPPKSVPSPGSPPLVYLPPVVFPPPPSPSRHRKKPPQYALWCVAKPTVPDPIIQEAMDYACGSGADCKSIQPNGLCFQPNTLLSHASFAFNSYWQNTKIGGGTCDFGGTAMLVTVDPSYDKCNFMLT* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g03065 293 FunFam Glucan endo-1,3-beta-glucosidase 4 202 293 - -
Lapu6g03065 293 SMART X8_cls 206 290 IPR012946 -
Lapu6g03065 293 Gene3D - 203 293 - -
Lapu6g03065 293 PANTHER BETA-1,3 GLUCANASE 115 290 IPR044788 -
Lapu6g03065 293 MobiDBLite consensus disorder prediction 119 176 - -
Lapu6g03065 293 MobiDBLite consensus disorder prediction 102 176 - -
Lapu6g03065 293 PRINTS Proline rich extensin signature 127 148 - -
Lapu6g03065 293 PRINTS Proline rich extensin signature 165 182 - -
Lapu6g03065 293 PRINTS Proline rich extensin signature 148 164 - -
Lapu6g03065 293 PRINTS Proline rich extensin signature 82 98 - -
Lapu6g03065 293 PRINTS Proline rich extensin signature 115 127 - -
Lapu6g03065 293 Pfam X8 domain 206 277 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g03065 Lapu-Chr6 41751686 41755644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g03065 207 290 Glycoside Hydrolase AT4G26830 52.941 2.63e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g03065 - - pvu:PHAVU_006G003800g 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g03065 6 41751686 41755644 Lapu6g03065 6 41751686 41755644 ECH
Lapu6g03065 6 41751686 41755644 Lapu6g03065 6 41751686 41755644 PCT