Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g03029 ATGGCGTTGGTGAGTACAGCTCCTCCGCAGGATCGTCCTCTTCGTGTCTACGCCGACGGCATTTACGATCTCTTTCACTTCGGCCATGCTCGCTCCCTTGAACAAGCCAAGAAATCATTCCCAAACACATACCTTCTGGTTGGATGTTGCAGCGATGCAGTGACCCACAAGTACAAAGGCAAAACAGTTATGACAGAAGATGAACGTTACGAGTCCCTTCGTCATTGCAAATGGGTGGATGAAGTGATTCCAGGTGCACCTTGGGTTATTAATCAAGAGTTTCTTGACAAGCACAGAATAGACTATGTTGCTCATGACTCTCTTCCATACGCTGATACTAGTGGTGTTGCAAATGATGTTTATGAATTCGTTAAGGCTGTTGGGAAATTCAAGGAAACCCAAAGAACTGAAGGGATTTCTACATCAGATGTGATCATGAGAATTGTTAAAGATTACAATCAATATGTTCTGAGGAACTTGGATCGTGGGTACTCAAGAAAAGACCTTGGTGTCAGCTATGTGAAGGAAAAACGACTAAGGGTGAACAGGAGGCTAAAAACTTTTCAAGAGAAAGTAAAAGAACAACAGGAAAAGATTCAAACTGTTGCAAAGAATGCTGGTATGCATCGAAATGAGTGGGTGGAAAATGCTGATCGTTTTGTTGTTGGATTTCTAGAAATGTTTGAAGAAGGTTGTCATAAAATGGGGACTGCAATTAGGGATGAAATTCAAAAGAGGTTAATGGGTGAGCAACAAAGCAAGGCTTCATTTCTTCTTGAAAATGGTGAGGAAGATGATGATGAAGAGTATTATTATTATGAGGGGGTGGATGATAGCGATGAAGAATGTTTTGAGGAATATTTTGATGATGATAATGGGAAAGACCAAACGAAAAAGTAG 900 0.4089 MALVSTAPPQDRPLRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCSDAVTHKYKGKTVMTEDERYESLRHCKWVDEVIPGAPWVINQEFLDKHRIDYVAHDSLPYADTSGVANDVYEFVKAVGKFKETQRTEGISTSDVIMRIVKDYNQYVLRNLDRGYSRKDLGVSYVKEKRLRVNRRLKTFQEKVKEQQEKIQTVAKNAGMHRNEWVENADRFVVGFLEMFEEGCHKMGTAIRDEIQKRLMGEQQSKASFLLENGEEDDDEEYYYYEGVDDSDEECFEEYFDDDNGKDQTKK* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g03029 299 NCBIfam cytidyltransferase-like domain 15 82 IPR004821 GO:0003824|GO:0009058
Lapu6g03029 299 PANTHER CYTIDYLYLTRANSFERASE 6 274 IPR045049 GO:0004105|GO:0006657
Lapu6g03029 299 FunFam Choline-phosphate cytidylyltransferase 2 2 230 - -
Lapu6g03029 299 CDD CCT 12 163 IPR041723 -
Lapu6g03029 299 Coils Coil 178 205 - -
Lapu6g03029 299 Gene3D HUPs 1 230 IPR014729 -
Lapu6g03029 299 Pfam Cytidylyltransferase-like 17 146 IPR004821 GO:0003824|GO:0009058
Lapu6g03029 299 SUPERFAMILY Nucleotidylyl transferase 15 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g03029 Lapu-Chr6 40761450 40766430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g03029 40 295 Acyl Lipid Metabolism Gene Families AT2G32260 71.984 5.22e-134 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g03029 K00968 - gmx:100790615 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g03029 6 40761450 40766430 Lapu6g03029 6 40761450 40766430 ECH
Lapu6g03029 6 40761450 40766430 Lapu6g03029 6 40761450 40766430 PCT