Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02849 ATGGGGTTGAGAGCAGTTTTTGTTTGGTGCATATGGTTGGGGTTGATAGAATTTTCGGTTGGAGGAAGGGTGAGGCACTACAGGTTTGATGTGGAGTACATGATCCGAAAGCCAGATTGCTTGGAACACGTTGTGATGGGAATCAACGGCCAGTTTCCAGGACCAACCATTAGGGCTGAAGTTGGTGACACTCTTGACATTGCTCTCACCAACAAGCTTTTCACTGAGGGAACTGTCATTCACTGGCATGGAATCAGACAGGTTGGAACTCCTTGGGCAGATGGCACTGCTGCCATCTCACAGTGTGCTATAAACCCAGGAGAGACATTTCATTACAGGTTTACAGTTGACAGGCCTGGAACATATTTCTATCATGGACATTATGGAATGCAAAGATCAGCAGGTTTATATGGTTCACTTATAGTAGATTTGCCAAAGGGACAAAACGAACCGTTTCATTATGATGGTGAGTTCAACCTTCTTCTAAGTGATTTCTGGCACACCAGCTCACATGAACAAGAAGTTGGTCTTTCTTCCCTACCATTCAAATGGATTGGTGAACCTCAGACTCTGCTGATCAATGGAAGGGGACAATTCAATTGTTCTCTGGCAGCTAAGTTCATAAACACCACCCTACCCGAGTGCCAATTTAAAGGTGGTGAAGAATGTGCCCCTCAAATCCTCCACGTCCAGCCAAACAAGACCTACAGGATCAGAATTTCCAGCACCACTGCCTTAGCTTCACTCAACTTAGCCATTTCGAATCACAAAGTTATTGTGGTGGAAGCTGATGGAAACTACGTAACACCATTTGAGGTTGATGATATGGACATTTACTCTGGTGAAAGCTACTCAGTGCTCCTTCGAACAGATCAAGATCCAAAGAAAAACTATTGGATTTCAATTGGGGTTAGAGGAAGAAGACCTAACACCCCACAAGGCTTAACAATTCTAAACTACAAGACAATTTCAGCCTCAGTTTTTCCAACTTCTCCACCACCAATCACACCCCTTTGGAATGATTTTGAGCGTAGCAAAGCATTCACCAAGAAAATCATTGCCAAGATGGGAACCCCACAACCTCCGAGACGTTCTGATCGTACTGTTTTCCTCCTCAACACCCAAAATCGCGTTGATGGGTTCACCAAATGGTCCATTAACAACGTCTCCCTAACATTGCCATCAACTCCTTATCTGGGTTCCATCAAGTTCAAACTAAACGATGCATTTGATCAAACACCTCCACCTGTGACCTTCCCTCAAGACTATGACATTTTCAACCCTCCTGTGAACCCTAATTCAACCATTGGCAATGGGGTGTACAAGTTCAACCTTAACGAGGTTGTCGATGTGATATTGCAGAATGCAAACCAGTTGACTGGGAATGGTAGTGAGATTCACCCTTGGCACTTGCATGGGCATGACTTCTGGGTTTTGGGGTATGGAGAAGGCAAATTCAAACAAGGTGATGAGAAGAAATTCAACTTGACACATGCACCACTGAGGAACACTGCAGTAATATTTCCATATGGTTGGACTGCGTTGAGGTTTAAGGCAGATAATCCAGGAGTTTGGGCCTTCCATTGCCACATTGAACCACATTTGCACATGGGAATGGGTGTTATTTTTGCCGAGGGTGTTCACAAAGTTGGAAAAATCCCGAAAGAAGCATTAACTTGTGGACTTACAGGGAAGAAACTAGTAGAAAATGGACACTACTGA 1722 0.4413 MGLRAVFVWCIWLGLIEFSVGGRVRHYRFDVEYMIRKPDCLEHVVMGINGQFPGPTIRAEVGDTLDIALTNKLFTEGTVIHWHGIRQVGTPWADGTAAISQCAINPGETFHYRFTVDRPGTYFYHGHYGMQRSAGLYGSLIVDLPKGQNEPFHYDGEFNLLLSDFWHTSSHEQEVGLSSLPFKWIGEPQTLLINGRGQFNCSLAAKFINTTLPECQFKGGEECAPQILHVQPNKTYRIRISSTTALASLNLAISNHKVIVVEADGNYVTPFEVDDMDIYSGESYSVLLRTDQDPKKNYWISIGVRGRRPNTPQGLTILNYKTISASVFPTSPPPITPLWNDFERSKAFTKKIIAKMGTPQPPRRSDRTVFLLNTQNRVDGFTKWSINNVSLTLPSTPYLGSIKFKLNDAFDQTPPPVTFPQDYDIFNPPVNPNSTIGNGVYKFNLNEVVDVILQNANQLTGNGSEIHPWHLHGHDFWVLGYGEGKFKQGDEKKFNLTHAPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIEPHLHMGMGVIFAEGVHKVGKIPKEALTCGLTGKKLVENGHY* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02849 573 Pfam Multicopper oxidase 158 321 IPR001117 -
Lapu6g02849 573 ProSitePatterns Multicopper oxidases signature 2. 528 539 IPR002355 GO:0005507
Lapu6g02849 573 SUPERFAMILY Cupredoxins 151 356 IPR008972 -
Lapu6g02849 573 FunFam L-ascorbate oxidase 13 144 - -
Lapu6g02849 573 NCBIfam L-ascorbate oxidase 24 563 IPR017760 GO:0005507|GO:0005576
Lapu6g02849 573 Gene3D - 152 358 IPR008972 -
Lapu6g02849 573 PANTHER MULTI-COPPER OXIDASE 40 546 IPR045087 -
Lapu6g02849 573 SUPERFAMILY Cupredoxins 19 171 IPR008972 -
Lapu6g02849 573 Gene3D - 16 145 IPR008972 -
Lapu6g02849 573 Pfam Multicopper oxidase 437 546 IPR011706 GO:0005507|GO:0016491
Lapu6g02849 573 ProSitePatterns Multicopper oxidases signature 1. 523 543 IPR033138 -
Lapu6g02849 573 Pfam Multicopper oxidase 31 144 IPR011707 GO:0005507
Lapu6g02849 573 CDD CuRO_3_AAO 365 554 IPR034267 GO:0005507
Lapu6g02849 573 Gene3D - 359 571 IPR008972 -
Lapu6g02849 573 SUPERFAMILY Cupredoxins 362 560 IPR008972 -
Lapu6g02849 573 FunFam L-ascorbate oxidase 359 571 - -
Lapu6g02849 573 FunFam L-ascorbate oxidase 152 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02849 Lapu-Chr6 32240334 32247382 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02849 K00423 - gmx:100776011 1122.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02849 6 32240334 32247382 Lapu6g02849 6 32240334 32247382 ECH
Lapu6g00700 6 7322794 7327829 Lapu6g02849 6 32240334 32247382 ECH
Lapu6g02849 6 32240334 32247382 Lapu6g02849 6 32240334 32247382 PCT