Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02631 ATGAGTAAACCTGAAGATTCTGAAAAATCACCAACAAGATTTGAAGGAACAGAAGAGGCAAGTAAGAATACCTCACTGTTCCGACGGTGGGTATTGGAAGAAAACTGGAACAACGTTATTTCTTTATATGGTAACCAGTCCTACCACAAAATCAAAATCAACGAAAGCAGAGGCACTGCACTACATGTGGCAGTGAATGATGGGAAATTGAAGCATGTTCACTCTCTTGTTGAAAAAATCTTGAGATGTGAAGAGAGGGAAGGGGTGAAGAATGACACTAGTGCACTGAGATCAACCAACGAGAGAGGGGACACTCCATTGCACCTTGCAGCCTCAAGAGGGTTCGTTGAAAAGTGTAAGTCCATCATAGGGGGAAGTGGAGAAAGGAAGAATTTGATTAGGGTTACCAACCACAATGGTGAAACACCTCTTTTCAGGGCAGTGTTCACATGCCAAACAAGGGCCTTTGTGTACCTTTACCATGTTTCCAAAGATTTATATGTTCCTCTTAGGAACAATAATAAGGAGACCATCCTTCATTGTGCCATCCGCAGAGAATTCTTGGCTCATTGTTATCCTGGACTTGTGGATACACGAGACAAAGATGGAGTCACACCTTTCAAACTTCTTGCTTACAAACCTTCAGCCTTCACAACCAATCTCTCATGGTGGAAGAAAATACTATATCATGGTATACATGTAGAACCTCTAGATGCTGAGAAAGCTATAAATTCCTACATGTACAAAGATGAGACATTTGAGGAATCTGATCTAAAAGGTATACTGGTAGAAAATGATGTGAAGAGAACACAAATTGTGGAACAAAAGTATGCCTCTTGTGTTCTGTTTGTAAAGATTGCTCTTCGATTTGCATCCAAATGTCTTAGCCTCTCAGGATTGGATGTCAATAAACTAGACTTGAAAGCAATAAAGAAGATAAGGCAGAAGCATAAATGGGGTATTCAGCTATTGAAGATTTTCATGCAAAATTACTCGGGCATGGAAACACCAGCTGAAAATATCGATATTGACGTTAATATTAAAAGGGATCCGCTCCCCACTACAGAATTTAAGAGTGATGATATTAAAGTTAATATTAAAAAGGATTGGCAAGCCACTACCACCAAGTCTACCAAGTTGGAGAGGCAAAGTCAAGAAAAAACTACAACAAAATCTGAGAAGCACGTCGACGACAAGGAGACTGTATTTCTGGCTGCTGCAAAAAACGGCGTTCTGGAGATTGTGTCTGAACTTTTATCCAAAATACCGAGTGTTGTGCATGAAACCAACTCCAACAATGAAAACGTGTTGCTTGTTGCAGTGAATAACAGGCAAACCAATGTTGTTGTAGAGTTGAGGAAGAGATTGGGTAAGGACCTGTTCAATAGCTTAATTTTGGAAGTTGATAACTACGAGAACACTGTGTTGCATCTAGCTGCAGGTACAACTAGCAACACTGTAAGGACATGGCAGATTGCTGGTGCTGCCATGCAAATGATGTGGGATATGAAGTGGTATCAGTACGTAAGCGACCTAGTGCCAGATCATTTCACTTTCAGAACCAACAAAGACGAGAAAACCAGCGCAGAAATCTTCAAGGAGAAGCACCAAGACCTGGTCCACGACAGCTCCGACTGGCTGAAGGAAGCCGCCAACTCCTGCTCCGTGGTGGCCGCCCTAATCGCCGGCGTCTCCTTCGCCACTTCCAGCACCGTCCCTGGCGGCACCGACAACGGAAAGCCGGCGCTTGAAGGGAAGCCGGCTTTCGATGCCTTCGCCATTTCCTCTCTCGTCGGGCTCTGCTTCTCCGTCACCGCCCTCATCATGTTTCTGGCCATACTCACCTCCCGCAAACAGGCGCAGGACTTCCAGAAGAGCTTGCCATTGAAGCTTCTCTTCGGCCTGAGCTCTCTCTTCGTCTCCATTGCTTCCATGCTGGTTTCGTTCTGCACTGCGCATTTCTTCGTGCTGGATGAGAGGTACAGGCGCATCATGTTCCCTGTCTACGTTGCCACTTGTTTGCCCATCACTTTCTATGCAGTGGTGCAGTTTCCTCTCTATGCTGATCTGCTTAAAGCCATCTTCAAGAAGGTGCCACAACCAAGTATTGCCAGCAGCCAATTCTAG 2127 0.4452 MSKPEDSEKSPTRFEGTEEASKNTSLFRRWVLEENWNNVISLYGNQSYHKIKINESRGTALHVAVNDGKLKHVHSLVEKILRCEEREGVKNDTSALRSTNERGDTPLHLAASRGFVEKCKSIIGGSGERKNLIRVTNHNGETPLFRAVFTCQTRAFVYLYHVSKDLYVPLRNNNKETILHCAIRREFLAHCYPGLVDTRDKDGVTPFKLLAYKPSAFTTNLSWWKKILYHGIHVEPLDAEKAINSYMYKDETFEESDLKGILVENDVKRTQIVEQKYASCVLFVKIALRFASKCLSLSGLDVNKLDLKAIKKIRQKHKWGIQLLKIFMQNYSGMETPAENIDIDVNIKRDPLPTTEFKSDDIKVNIKKDWQATTTKSTKLERQSQEKTTTKSEKHVDDKETVFLAAAKNGVLEIVSELLSKIPSVVHETNSNNENVLLVAVNNRQTNVVVELRKRLGKDLFNSLILEVDNYENTVLHLAAGTTSNTVRTWQIAGAAMQMMWDMKWYQYVSDLVPDHFTFRTNKDEKTSAEIFKEKHQDLVHDSSDWLKEAANSCSVVAALIAGVSFATSSTVPGGTDNGKPALEGKPAFDAFAISSLVGLCFSVTALIMFLAILTSRKQAQDFQKSLPLKLLFGLSSLFVSIASMLVSFCTAHFFVLDERYRRIMFPVYVATCLPITFYAVVQFPLYADLLKAIFKKVPQPSIASSQF* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02631 708 SMART ANK_2a 102 132 IPR002110 GO:0005515
Lapu6g02631 708 SMART ANK_2a 139 168 IPR002110 GO:0005515
Lapu6g02631 708 SMART ANK_2a 398 428 IPR002110 GO:0005515
Lapu6g02631 708 SMART ANK_2a 432 462 IPR002110 GO:0005515
Lapu6g02631 708 SMART ANK_2a 56 85 IPR002110 GO:0005515
Lapu6g02631 708 MobiDBLite consensus disorder prediction 375 395 - -
Lapu6g02631 708 SUPERFAMILY Pseudo ankyrin repeat-like 387 538 - -
Lapu6g02631 708 PANTHER CASKIN 54 696 - -
Lapu6g02631 708 MobiDBLite consensus disorder prediction 1 20 - -
Lapu6g02631 708 MobiDBLite consensus disorder prediction 1 16 - -
Lapu6g02631 708 Pfam Ankyrin repeats (3 copies) 61 160 IPR002110 GO:0005515
Lapu6g02631 708 Pfam Domain of unknown function 545 655 IPR026961 -
Lapu6g02631 708 Gene3D - 21 247 IPR036770 -
Lapu6g02631 708 Gene3D - 322 555 IPR036770 -
Lapu6g02631 708 MobiDBLite consensus disorder prediction 380 395 - -
Lapu6g02631 708 SUPERFAMILY Ankyrin repeat 48 480 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02631 Lapu-Chr6 26540974 26552205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02631 406 649 Miscellaneous Gene Families AT3G12360 25.263 1.68e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02631 - - gmx:100813041 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02631 6 26540974 26552205 Lapu6g02631 6 26540974 26552205 ECH