Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02630 CAGCTAGCTAGCTCCAATTTCTCGTCTATCATCATCCACCCATTTTATCATTCTTCGTTACAACCTTACAGAATGAGTACACTTGAATCATCACCAAGATTAGTTTTTCAAGAATCATCAACAATAATTGAAGGAACAGAAGTGACAAGTGTAGATCATATCTCACTGTTCCGAGGGTGCGTATTGGAGGGAAGATGGGACTACGTTATTTCTGCATATAGAAACGACAGTGACTACCACAAGATCAGAATCAACGAAAGCAGAGGCACTGCACTGCATGTGGCAGTGAATGATGGGAAAGTGGAGCTTGTTAACACTCTTGTTGGAGCAATCTTGAGCCATGAAGGGAGGGAAGTGGTGAGGAGTGACAGTGCACTGAGATCAACCAATGAGAGAGGGGACACTCCACTGCACCTTGCATGCTCAAGAGGGTTCATTGGCATGTGTAAGTGCATCATAGGGGAAAATGGGGAAAGGAAGGATTTGATTAGGGTTAGGAACTACAAAGGTGAAACACCTCTTTTCAGGGTAGTGCTCACATGCCAAACAAAGGCCTTTGTGTACCTTTACAATGTTTCCAAAGATTTAGATGTTCCTCTTAGGAACTCTGATGGGGACACCATCCTTCACCATGCCATTTGGAGAGAATTCTTGGATTTGGCAATTATAATAGCTCATTGTTATCCTGGAATTGCGAACGCACGAAACAAAGATGGAGTCACACCTCTGAAAGTTCTTGCCTGCAAACCTTCAGCCTTCAAGAGTGGAACCAATCTCCCATGGTGGAAGCAAATTCTATATTATGGTATACTTGTAGAACCTCTAGATGCTGAGAAAGCCATAAAATCCTACATGGAGAAAGTTGAAAAATTTGAGGACCATGAACTCAAAGTGAATGTAATGTTAGAAAATGAAGCCAAGAAAGCACAAATCTTTGTGGAACAAAAGTATGCCACTTCTGTTCGGTTTGTAAAGAGTGCTGTTCGATTTGCATTCAAATGTCTTAGTCTTTCAGGATTGGGTGTCACTGCACAAGACTTGAAAGCAATAAAGAAGATAAGGCAGAAGCACAGATGGAGTCGTCAGCTCTTGCATATTTTCATGCAAAGTCCTCATGAGTCATACATGGGAATAAGTGGGGGTCAACCATTCATGAAATTTGACGGAGGAGACAATGACTTAGCGCAACCCTTTATTACTCAACAACAGCTCCAAATGGTGGGTGCAGCTAGCTCAGGCCAGAGTCAACAAGAAACTAGAACAGAATCTGCTACAGCAAAAAATGAGGAAAAGGAAACAACATTTGTGTCAGTGGCAAAAGCTGGCATAGTCGACCTTGTGAATGAGCTTCAAAACAAAGTGCCAATTGCCCTCCATGAACCTACCACTCCTGAGAAGGAAAACCTGCTGGTTGTGGCAATGAAGAACATCAAATACAAATTTGGAGAACACCACGTTGACAAGAAGGAGACTGCGTTTCTGGCTGCTGCAAAAAACGGCATTGTGGAGATTGTGTTTGCAATTCAATCCAGAATACCGAGTGCCGTGCATGAAACCAACTCCAACAATGAAAACGTGTTGCTTGTGGCAGTGAAGAACAGGCAAACCAATGTTGTTGAGGTGTTGAGGAAGAATATGGAGAAGGAACTGTTTGATAGCTTAATTTTGGAAGTGGATAACAGGGATAACACTGTGTTGCATTTAGCTGCAGGTACAACTAGCAACACTGAAAGGACATGGCAGATTGCTGGTGCTGCCATGCAAATGATGTGGGATATCAAATGGTATCAGTACGTGAGAGCCCTAGTGCCAGAACATTTCATTTTCAGAACCAACAAGGACGAGAAAACCGGCGGAGAAATCTTCAAGCAGAAGCACAAAGATCTGGTGAAGGAGAGCTCGGAGTGGCTGAAGGAAACCTCCAACTCCTGCTCCGTGGTGGCCGCCCTAATCGCCGGCGTCTCCTTCGCCACTTCCAGCTCCGTCCCTGGCGGCACCGACAACGGAAAGCCGGCGCTTGAAGGGAAGCCGGCTTTCGATGCCTTCGCCATCGCCTCTCTCATCGGGCTCTGCTTCTCCGTCACCGCCCTCATCATGTTTCTGGCCATACTCACCTCCCGCAAACAGGCGCAGGACTTCCGGAAGAGCTTGCCCTTGAAGCTTCTCTTCGGCCTGAGCTCTCTCTTCGTCTCCATTGCTTCCATGCTGGTTTCGTTCTGCACTGCGCATTTCTTCGTGCTGGATGAGAGGTACAGGCGCATCATGTTCCCTGTCTACGTTGCCACTTGTTTGCCCATCACTTTCTATGCAGTGGTGCAGTTTCCTCTCTATGCTGATCTGCTTAAAGCCATCTTCAAGAAGGTGCCACAACCAAGTATCACCAGCAGCCAATTCTAG 2397 0.4572 QLASSNFSSIIIHPFYHSSLQPYRMSTLESSPRLVFQESSTIIEGTEVTSVDHISLFRGCVLEGRWDYVISAYRNDSDYHKIRINESRGTALHVAVNDGKVELVNTLVGAILSHEGREVVRSDSALRSTNERGDTPLHLACSRGFIGMCKCIIGENGERKDLIRVRNYKGETPLFRVVLTCQTKAFVYLYNVSKDLDVPLRNSDGDTILHHAIWREFLDLAIIIAHCYPGIANARNKDGVTPLKVLACKPSAFKSGTNLPWWKQILYYGILVEPLDAEKAIKSYMEKVEKFEDHELKVNVMLENEAKKAQIFVEQKYATSVRFVKSAVRFAFKCLSLSGLGVTAQDLKAIKKIRQKHRWSRQLLHIFMQSPHESYMGISGGQPFMKFDGGDNDLAQPFITQQQLQMVGAASSGQSQQETRTESATAKNEEKETTFVSVAKAGIVDLVNELQNKVPIALHEPTTPEKENLLVVAMKNIKYKFGEHHVDKKETAFLAAAKNGIVEIVFAIQSRIPSAVHETNSNNENVLLVAVKNRQTNVVEVLRKNMEKELFDSLILEVDNRDNTVLHLAAGTTSNTERTWQIAGAAMQMMWDIKWYQYVRALVPEHFIFRTNKDEKTGGEIFKQKHKDLVKESSEWLKETSNSCSVVAALIAGVSFATSSSVPGGTDNGKPALEGKPAFDAFAIASLIGLCFSVTALIMFLAILTSRKQAQDFRKSLPLKLLFGLSSLFVSIASMLVSFCTAHFFVLDERYRRIMFPVYVATCLPITFYAVVQFPLYADLLKAIFKKVPQPSITSSQF* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02630 798 PANTHER CASKIN 85 786 - -
Lapu6g02630 798 Gene3D - 60 305 IPR036770 -
Lapu6g02630 798 Gene3D - 396 640 IPR036770 -
Lapu6g02630 798 SMART ANK_2a 87 116 IPR002110 GO:0005515
Lapu6g02630 798 SMART ANK_2a 488 518 IPR002110 GO:0005515
Lapu6g02630 798 SMART ANK_2a 169 198 IPR002110 GO:0005515
Lapu6g02630 798 SMART ANK_2a 132 161 IPR002110 GO:0005515
Lapu6g02630 798 SMART ANK_2a 522 552 IPR002110 GO:0005515
Lapu6g02630 798 SMART ANK_2a 204 233 IPR002110 GO:0005515
Lapu6g02630 798 Pfam Domain of unknown function 635 745 IPR026961 -
Lapu6g02630 798 Pfam Ankyrin repeats (3 copies) 92 190 IPR002110 GO:0005515
Lapu6g02630 798 SUPERFAMILY Ankyrin repeat 90 570 IPR036770 -
Lapu6g02630 798 FunFam Uncharacterized protein 472 631 - -
Lapu6g02630 798 MobiDBLite consensus disorder prediction 409 431 - -
Lapu6g02630 798 FunFam Uncharacterized protein 54 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02630 Lapu-Chr6 26509806 26525500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02630 433 739 Miscellaneous Gene Families AT3G12360 23.851 6.63e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02630 - - var:108342540 1281.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02630 6 26509806 26525500 Lapu6g02630 6 26509806 26525500 ECH