Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02604 ATGAATGGCGGCGTTTTCTGCCAGCGGGCACCGTGGGCCGCCGGAATTGGCGGAGCTACGGTGGCCGGCGCTGCACTATTGCGTTTGTGTTCGTCTAAGCGCTCTCTGCCATTCGCGTGCAAGAGCATCTCTACTGATACCCGAATAAAGGAAGCTGTTCAGACTGAAAAGGCCCCAGCGGCATTGGGGCCATATTCTCAAGCAATCAAAGCCAACAACCTTCTGTTTGTGTCGGGTGTTCTTGGCCTTGTTCCCCAGACTGGAAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAGGTTCTCAAAAATATGGGGGAGATACTAAAATCTGGGGGTGCTGGCTACTCATCTGTTGTTAAGACAACAATATTGTTGGCTGACTTGAAGGACTTCAAGAAAGTTAACGAGATCTATGCTAAATACTTCCCTTCACCTCCACCAGCTCGGTCAACCTATCAAGTAGCTGCCTTGCCAATGGATGCCAAGATTGAAATTGAGTGCATAGCAGCACTTTGA 522 0.4904 MNGGVFCQRAPWAAGIGGATVAGAALLRLCSSKRSLPFACKSISTDTRIKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLVPQTGKFISDNVEDQTEQVLKNMGEILKSGGAGYSSVVKTTILLADLKDFKKVNEIYAKYFPSPPPARSTYQVAALPMDAKIEIECIAAL* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02604 173 ProSitePatterns Uncharacterized protein family UPF0076 signature. 149 167 IPR019897 -
Lapu6g02604 173 NCBIfam Rid family detoxifying hydrolase 50 172 IPR006056 -
Lapu6g02604 173 Gene3D - 45 172 IPR035959 -
Lapu6g02604 173 CDD YjgF_YER057c_UK114_family 65 171 - -
Lapu6g02604 173 Pfam Endoribonuclease L-PSP 56 172 IPR006175 -
Lapu6g02604 173 FunFam Reactive Intermediate Deaminase A, chloroplastic 47 173 - -
Lapu6g02604 173 SUPERFAMILY YjgF-like 50 173 IPR035959 -
Lapu6g02604 173 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 51 172 IPR006175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02604 Lapu-Chr6 26151866 26155322 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02604 K09022 - gmx:100785544 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02604 6 26151866 26155322 Lapu6g02604 6 26151866 26155322 ECH