Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02592 ATGGTTCAGATCGCGAGGAGGAAGAAGGGACGGCCCTCAAAGGCGGATCTAGCGCGCCGCTCCGGTGGGTCTCCGGCCGCCGCGTCGCAGCCCGATCTTCGGCGAAGCCATCGGCGCCGGAGCGTGAGGTACAACATAATCGACTACGACGGCGACTACCTCGACGACGAGGAGGACGAGAGGAGGCGCGAGAAGAAGAAGCTCAAGCTCATGGCGAAGCTGAACCAGGATGGCGAAGAAGAAGAGCGTGAAGAAGAAAACGAGACAACGCCCAGCCGCACTTGCGCTGATGCACCGGTGGAAGAATACGAAGACGACGAAAACGAACAAGAGGAAGAGCCCGTACACGAACAAGAGGAAGAGCACGAAGAAGACGAAGACGGTGTGGTAAAGGGCAGAAAAGTGGAATCGAAAGGGCTCCACTCTGTTTCTGTTTCAGGAACTCCGGTGATTCTTCAATCTGGGATTCCATTGCCTGATAAGAGAACTCTGGAATTGATCCTTGACAAGCTTCAGAAGAAGGACACTTATGGTGTGTTTGCGGAGCCTGTTGATCCAGAAGAGCTTCCTGATTATCATGATGTGATCGACCATCCCATGGACTTTGCCACTGTTAGGAAGAACTTGGCAGCTGGATCTTATACTACCTTAGAACAGTTTGAGAGTGATATATTTTTAATTTGCTCAAACGCAATGCAATACAATGCAGCGGAGACTATATACCACAAACAGGCACGATCAATACAAGAACTTGGACGGAAGAAGTTTGAGAAGTTAAGGATTGGCTTTGAACGCTCTCAGATGGAGCAGAAATCAGAACAAAAAGCAGGCTCTAATTATTTAGTTAAGAAGCATCCAAAGAAGCCTCTGGTACGTGCCTCACAGGAACCTATTTGCTCTGATTTCTCTTCAGGAGCAACTCTTGCTACTATTGCAGATATACAGCCAACTTCCCATCCGATGCAAGGTGGTAGATGTGAGAGGCCTGGTAATATTGATGGTATTTTGGAGGCAAATGCTTTCTGGATTGATGCATATCAGGAGAAAACTGAAGATGTTTTGTCAGGGAGAGGCCTTCACTCTAAGTGGGGAAGGAAGTCCGTTGTGCTTGATGAAAGTCGGCGTGCATCTTATAACATGTCCAATCAACCAATTGGTCGATCAGAATCAATTTTTATGACTTTTGACAGTGAAATGAAGCAGCTGGTTACTGTTGGACTTCATGCAGAATATTCCTATGCTAGAAGTTTGGCTCGTTTTAGTGCATCTCTAGGACCCATTGCTTGGAAAATTGCTTCCCACAGGATTCAGCAGGCACTGCCAACTGGCTTTAAATATGGTCGTGGTTGGGTTGGAGAGTATGAACAGCTTCCAACCCCAATATTAATGGTTAATAACCAGTTCCAAAAAGGAACTAGTTTGGTCATGAAGTTGCATTCAACTATTGAATTACCAAAGGGTGACAAAAATGGTAAGAATGTGGAACCCAGCATTGAGCATCCTGTCAATGGACAGATGCTTGAGGGAAAACATCCTTTGATGCATGATTTAGAAGGAAAACCTTTCTGTGGTTCTGCTGGAGTAAGGCTCGGTGCTCCTGCCATCCTAAATCATGAGCAGAACAACCAATCCAGGAAAATAGGCAAATCTGAGAATAAGGGTTTGAAACAAGAGGAGTTGAATTGTTCTTCCTCAAGTAAGCAGAATAATAATGGTCTGGTTCCAAAGTTTACAAGTAACACTCCTACAGCAGAGTCCAAGCCCAGAGAGATGGTGCCAAGGAACATGTTCAAGCAGCCAGATGTCAGTGGAGAGTTGCCTAATGGAAAAATTACAAATACAAGTTTGAACAGACAGGTGACTGGTCCATCACCTGAAAGTACATCAAACCAATCAAGCAGGGCAGGTCCTCTTGTCCATGGGAAGGAGCTGGGTGTTACTGACTCTGTCAAGTTGATGGGAATGTTCGCCGAAAGGGCTCAAAAGCAACACAATTCCAATCATTTGCTTGTTGATACTCCACCAGTGACACTGTCTGGTCCATCTGGACAGAGAGATGACTTAGGCAATGCTTCAGCAGCAGCTGCCCGTGCATGGATGTCTGTTGGGGCTGGAGGGTTTAAACAAGGTCCGGATAATTCTAGTTCACCCAAAAATCAGATGTCTGCAGATTCTATGTACAACTCAACAAGAGAGTTCCATCAGCATATTTCAAGAATTCGAGGGGAGTTTCCCTCTGCCGGAATGCCTTTCCAACCATTTCAAGCACTTGCTCCTCAACCTAGTCACACAGGCACTGTTTCACAATTTCCCAACGGGCCTATGGTTTTCCCTCAGTTGGCATCTGCTGACCAATCTAGATTTCAGATGCAGTCCCATTGGCGAGGGCTCAGTCCTCGTAGTCAGTCAAGGGAGAAACAGGAAACCTTTCCACCTGACTTGAATATTGGTTTTCAACCTCCAGGGTCACCTGCAAAACAATCTTCAGGTGTCCTTGTTGACTCACAGCAACCAGACCTGGCTTTGCAACTATGA 2535 0.4647 MVQIARRKKGRPSKADLARRSGGSPAAASQPDLRRSHRRRSVRYNIIDYDGDYLDDEEDERRREKKKLKLMAKLNQDGEEEEREEENETTPSRTCADAPVEEYEDDENEQEEEPVHEQEEEHEEDEDGVVKGRKVESKGLHSVSVSGTPVILQSGIPLPDKRTLELILDKLQKKDTYGVFAEPVDPEELPDYHDVIDHPMDFATVRKNLAAGSYTTLEQFESDIFLICSNAMQYNAAETIYHKQARSIQELGRKKFEKLRIGFERSQMEQKSEQKAGSNYLVKKHPKKPLVRASQEPICSDFSSGATLATIADIQPTSHPMQGGRCERPGNIDGILEANAFWIDAYQEKTEDVLSGRGLHSKWGRKSVVLDESRRASYNMSNQPIGRSESIFMTFDSEMKQLVTVGLHAEYSYARSLARFSASLGPIAWKIASHRIQQALPTGFKYGRGWVGEYEQLPTPILMVNNQFQKGTSLVMKLHSTIELPKGDKNGKNVEPSIEHPVNGQMLEGKHPLMHDLEGKPFCGSAGVRLGAPAILNHEQNNQSRKIGKSENKGLKQEELNCSSSSKQNNNGLVPKFTSNTPTAESKPREMVPRNMFKQPDVSGELPNGKITNTSLNRQVTGPSPESTSNQSSRAGPLVHGKELGVTDSVKLMGMFAERAQKQHNSNHLLVDTPPVTLSGPSGQRDDLGNASAAAARAWMSVGAGGFKQGPDNSSSPKNQMSADSMYNSTREFHQHISRIRGEFPSAGMPFQPFQALAPQPSHTGTVSQFPNGPMVFPQLASADQSRFQMQSHWRGLSPRSQSREKQETFPPDLNIGFQPPGSPAKQSSGVLVDSQQPDLALQL* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02592 844 MobiDBLite consensus disorder prediction 606 636 - -
Lapu6g02592 844 MobiDBLite consensus disorder prediction 782 809 - -
Lapu6g02592 844 MobiDBLite consensus disorder prediction 557 586 - -
Lapu6g02592 844 MobiDBLite consensus disorder prediction 755 844 - -
Lapu6g02592 844 MobiDBLite consensus disorder prediction 757 775 - -
Lapu6g02592 844 MobiDBLite consensus disorder prediction 1 130 - -
Lapu6g02592 844 MobiDBLite consensus disorder prediction 821 844 - -
Lapu6g02592 844 MobiDBLite consensus disorder prediction 100 125 - -
Lapu6g02592 844 PANTHER BROMODOMAIN CONTAINING PROTEIN 5 843 - -
Lapu6g02592 844 MobiDBLite consensus disorder prediction 42 78 - -
Lapu6g02592 844 SMART bromo_6 153 261 IPR001487 GO:0005515
Lapu6g02592 844 SUPERFAMILY Bromodomain 157 259 IPR036427 GO:0005515
Lapu6g02592 844 PRINTS Bromodomain signature 205 223 IPR001487 GO:0005515
Lapu6g02592 844 PRINTS Bromodomain signature 189 205 IPR001487 GO:0005515
Lapu6g02592 844 PRINTS Bromodomain signature 223 242 IPR001487 GO:0005515
Lapu6g02592 844 PRINTS Bromodomain signature 175 188 IPR001487 GO:0005515
Lapu6g02592 844 Gene3D - 159 279 IPR036427 GO:0005515
Lapu6g02592 844 MobiDBLite consensus disorder prediction 536 642 - -
Lapu6g02592 844 ProSitePatterns Bromodomain signature. 178 234 IPR018359 -
Lapu6g02592 844 CDD Bromodomain 160 256 - -
Lapu6g02592 844 ProSiteProfiles Bromodomain profile. 172 242 IPR001487 GO:0005515
Lapu6g02592 844 Coils Coil 54 74 - -
Lapu6g02592 844 Pfam Bromodomain 166 246 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02592 Lapu-Chr6 26006206 26013249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02592 K22184 - gmx:100799986 1244.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02592 6 26006206 26013249 Lapu6g02592 6 26006206 26013249 ECH
Lapu6g02592 6 26006206 26013249 Lapu6g02592 6 26006206 26013249 PCT