Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02586 ATGGAGCCTCACGCGACTTCCTTCGTGTCCAAGGCGCGCATCGCATTCCATTCCGCTGCAGCGAAAGCGGAGCGTGTTCTGTCGGACTTCAAAACCGATCGAGATTCCGATAAGCAAGTTCACGACGAGTTAGGGAGGCGGCGGGGCGATGAATCTGGTCGGAGCGAGCACGAGTCCAAGTTTCTCAATGAACTGAAGCATATAAAGTGGAGACCTCCGCATTTAGGAACAAAGCAGGATTGGCAAGATAGAATAAACAACATCCGAAAAGGGAGAAAAGAGGTTGAAGTAACAGACAAAGTTGGCGATTTAAACATTGCCTCCGCTCCATTTTATGTTGAAAATTCATACATTCTAAGTGTGAAAAATGATCTTGATGCCAAGGCTTCTGAATCAATTCCCTCGGTTGAAGGCTTAACTGCTGCGACTGAACACCCCATCCCTCCGTCGTCTGTCCTGAAGCAGTTGGCTATAGCTTTTGAGGTTGGAAGGAGAACAAACTCAATGAAAGATTTTGTAGCTTCATCAAGAGGTTCGTCACCTGCCAGAGAGAGGGCAGGCTTAAGTCTCTCTTCGATGAAGGCTTTAGTGTTGCGTGAAAAGGAGGGCAAACTTACCTCTGAGTTTAGTAGTGATGAGAAAGTAGTGTATTTGATTAATTCATTGTTTGATCCAGAGGGAAAGTTCCTTAGAAGGAAGATCAACTCTGATCCAGAGGAAACTTCCATATCATCTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGCTTAGTTGCTAAGCTAGCTGAAGTAATTGGAAACTTCAAGACGCTCCAAGAAATGGCTCTTTTTTGGTGCAGGGTTGTTGCTGAACTGAGAACACATTGGTCCAAAGAGAAGTATTTACCTGGAGTCCCCCAAGATAACATTCCAGATTTGAAGTCTTGTCTTCTGTATCAAAAATTTCAAGTAATTAATTGTTGCATTTCTCGGAAAAGGCGCTATATTATTGCCACTGAATCACTAAACTCTATGATGGTGGAAGCCAATTTAAATACGTTAAAACCAGCTAAGTATGCGGACAAAATTCCTGCAACCCCTTTGTTATATGCAAGGTTAAGAACTGGAGAGCTTGTTCTTCGACTCGGGGCTGATTGCCCATCTGGAGATCTGATGTTACTAGAAACAGGCGAGCCTGCATACTCTCCTGTCACCCAGGAGGGACCTTTGCTTACAGAAGATTTGATCAAAGAGACAGAGGAGTTTGTGCTGCGGACAGGAAGTGTTGGTGCTGGGTGCTCTCAACTCCTCTCTGATATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGCATTTTGGAAGATTTTGTGAGATGGTACTCTCCCCCTGACTGGACTGAAAGTGAGGGAAGTACTGATGATAGAGATTCTTTTTATTGCGGTGAGTCAATGACTACCAGAGGTCAACTAAGTCTACGAATGCAAAAGGAAGGTAATTTGTGGCGTGAATTATGGGAAACATCTAAATCAGTTCCAGCTGTTAAACAGGCACCTCTCTATGATGAGGATTTGGCAGTGGAGGGTATTCTAGATGCATTTGAGGACATCCAGCCTTCGGAGCTTTTTGAACAGCTGTTTGTTTCTCTGCTGGGTTCAGGATTTGCAATTGCTGAAAATATGCTCTCTGGTGACGTTGACATTTCGAAATTGTTAAATGACTGCAAGGAGTACATAGTAACCGCTTGTCAAAGCAACAGATTCAATGAGAAACTCGATGAGCTTGTTCAGATGTATGAAATGGTGGAGAAAATGATGCTGAATCCAGATGAGGCACTGAAGATAGTGAAGCTCATGGAAGAATCAACTATGACTACTAGTGAACCAAAACGCCGGATGTCTACTGGTGAAGCAAAGCACCGGTTTAAGCAACTTAGCCACATATTTGGTGGTAAAGATAAACCATTGACCTGGAAAGAAGAGGTAAACGATGAAAAAAAGTTGGTTCGACATTCTTTCTCAAGTTTCTTTGACAACAGCAAGTCATCTTTATTTTCAAAAAAGCCTCCTAAGCCTGGAAACCTATACCCTGTTGATCAACATCTCTCTCCGGAAAGTGATTGGACACTTGTTTAG 2112 0.4342 MEPHATSFVSKARIAFHSAAAKAERVLSDFKTDRDSDKQVHDELGRRRGDESGRSEHESKFLNELKHIKWRPPHLGTKQDWQDRINNIRKGRKEVEVTDKVGDLNIASAPFYVENSYILSVKNDLDAKASESIPSVEGLTAATEHPIPPSSVLKQLAIAFEVGRRTNSMKDFVASSRGSSPARERAGLSLSSMKALVLREKEGKLTSEFSSDEKVVYLINSLFDPEGKFLRRKINSDPEETSISSLPRDIHGAPPESLVAKLAEVIGNFKTLQEMALFWCRVVAELRTHWSKEKYLPGVPQDNIPDLKSCLLYQKFQVINCCISRKRRYIIATESLNSMMVEANLNTLKPAKYADKIPATPLLYARLRTGELVLRLGADCPSGDLMLLETGEPAYSPVTQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWTESEGSTDDRDSFYCGESMTTRGQLSLRMQKEGNLWRELWETSKSVPAVKQAPLYDEDLAVEGILDAFEDIQPSELFEQLFVSLLGSGFAIAENMLSGDVDISKLLNDCKEYIVTACQSNRFNEKLDELVQMYEMVEKMMLNPDEALKIVKLMEESTMTTSEPKRRMSTGEAKHRFKQLSHIFGGKDKPLTWKEEVNDEKKLVRHSFSSFFDNSKSSLFSKKPPKPGNLYPVDQHLSPESDWTLV* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02586 703 Pfam Rab3 GTPase-activating protein catalytic subunit 375 527 IPR026147 -
Lapu6g02586 703 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 128 685 IPR045700 GO:0005096|GO:0043547
Lapu6g02586 703 MobiDBLite consensus disorder prediction 29 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02586 Lapu-Chr6 25954597 25962095 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02586 K18270 - gmx:100800515 1137.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02586 6 25954597 25962095 Lapu6g02586 6 25954597 25962095 ECH
Lapu6g02586 6 25954597 25962095 Lapu6g02586 6 25954597 25962095 PCT