Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02581 ATGCACATTCAGAACCCCATACTTATTCCTACTACTTCCAATACAAATCTACCTCTAGTTCATCTTGTTCTTTCTCATCATTCTTCTTATTCCTTGCTCATTGATACCTTTTTTCTCTCATTTCCCAAAGCCATGAACAAGTTTAAGAAATCTCAAGTTCTAGTGCTCTGTGTTCTAGTTGTTCTTCTTGTCATCACACCCTCTTTACCTTCCTCACTTCGGCCAACCTACTTGTATTTCATCATAAACTTCCTTATCATGGCACTTTGTGCTGAAGCTGGACTCCTTTCAGTTTTTTCTAGGCCTCTAGAAGATAAAAAGCAACCTGTTTCTGTGATGCCTTCAGAAGCCATTTCTGAGAAAAGAGAACGGTCCATTTCCACCCCTATAGTTTCTGGTGCTGTCTCAGAACATGCTGAAAAGTCTGCATCTGAAAGGGTCGTTTGTGCCACCGAAGTGGACATGGTGCAAAATGGTCCTTCAATGCCTAGCCTTTTCATCATAGGGGGTGGAGAAGCTGATGAAGAAGTAATGGATGAAGAACTTGAAGCAGAAGAGGAGATTGGAGGAGTTAATGGGCAAGAGTTGTTTGCAAAAGCTGAGGCCTTCATTGGGAACTTCTACAAGCAACTGAAGATGCAAAAGTGA 648 0.4167 MHIQNPILIPTTSNTNLPLVHLVLSHHSSYSLLIDTFFLSFPKAMNKFKKSQVLVLCVLVVLLVITPSLPSSLRPTYLYFIINFLIMALCAEAGLLSVFSRPLEDKKQPVSVMPSEAISEKRERSISTPIVSGAVSEHAEKSASERVVCATEVDMVQNGPSMPSLFIIGGGEADEEVMDEELEAEEEIGGVNGQELFAKAEAFIGNFYKQLKMQK* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02581 215 Pfam Cotton fibre expressed protein 194 215 IPR008480 -
Lapu6g02581 215 PANTHER OS01G0532300 PROTEIN 45 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02581 Lapu-Chr6 25896760 25897449 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02581 - - ccaj:109811312 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02581 6 25896760 25897449 Lapu6g02581 6 25896760 25897449 ECH
Lapu6g02581 6 25896760 25897449 Lapu6g02581 6 25896760 25897449 PCT