Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02567 ATGGCAGCGACTGATGGTCAAAATCCTCTACTTGATGAAACCACCTGCGGTTCCTTGTTACATAAGCTTCAGGAAATATGGGATGAGGTTGGTGAGAGTGATGAGGAGCGAGACAAGATGCTCCTTCAGATAGAGCAAGAGTGCTTGGATGTGTACAAAAGAAAGGTTGAGATGGCTGCTAAATCAAGGGCACAACTACTTCAATCCTTGTCTGATGCTAAGCTTGAGCTGTCTAGTCTTTTATTGGCTCTTGGTGAAAACAGTTTAACGGGAATGCCTGACAAGACTTCAGGTACTATTAAGGAACAACTTGCAGCCATAGCACCGATACTTGAACAGCTTTGGCAACAAAAAGAGGAAAGAGTAAAGGAGTTTTCGGATGTACAGTTACAGATCGAACAAATATGTGGAGAGATAACTGGGGACTTGAACCCTGATCAGACTGGATCAGGATCATTTACAGTTGATGAGTCTGACCTGTCCTTGAAGAAGTTGGATGAATATCAATCCCAACTCCAAGAACTTCAAAGGGAAAAGAGTGAGAGGTTACACAAGGTTCTTGAATATGTGAGTACAGTGCATGATCTATGTGCTGTCCTTGGCATGGACTTCTTTAGTATTGTGACTGAAGTTCATCCAAGCTTAAATGATGCTATTGGTGTTCATTCCAAAAGCATAAGCAATGGCACACTAGCTAAACTGGCTAAGACAGTCTCGGCACTGAAAGAAGATAAAAAGCAGCGGCTACACAAGCTTCAAGAATTAGCTTCTCAGTTGATTGATCTGTGGAATCTAATGGATACCCCTGTAGAGGAAAGGAGACTATTTGATCATGTTACTTGTAATATCTCTGCTTCCGTAGATGAAGTCACTGTTCCCGGTGCCCTTGCTCTGGATTTGATTGAGCAGGCTGAAGTGGAAGTGGAAAGGCTTGATCAGCTGAAAGCCAGCAAGATGAAAGAAATTGCTTTCAAGAAGCAAGACGAGCTTGAAGCGATATATGCCCGTGCTCATGTAGAAATAAACCCTGAAGCTGCTAGAGGGAATATTTTATCATTGATTAACTCTGGAAACATTGAACCATCCGAATTACTGACTGACATGGACAAACAGATAGCTGCAGCAAAAGAAGAAGCTTTAAGCCGAAAAGAAATATTGGACAAGGTTGAGAAATGGATGTCAGCTTGTGAAGAAGAGAGTTGGCTTGAAGACTATAATCGGGATGAAAACAGGTATAGTGCAAGTAGAGGTGCACACGTAAACCTCAAACGTGCAGAGAAAGCTCGAATACTGGTCAGCAAAATTCCAGCTTTGGTTGATACATTGGTTGCTAAAACTCGCGCATGGGAAGAAGTAACCAACATGTCATTCACATATGATGGTGTTCCACTCCTTGCTATGTTGGATGAATATGCCATGCTCAGGCAAGAACGAGAAGAGGAAAAACGAAGGATGAGGGACCAGAAAAAGTATCATGAGCAACAACCCACAGATCAGGAATCTCTATTTGGTTCAAGACCTACCCCTGCAAGGCCACTTGGCAACAAGAAGGTAGTTGGCCCTCGTCTGAATGGAGGACCAAATGGTACTCCGAATCGACGGTTATCTCTTAATGCTCATCAAAATGGAAGCAGGTCCACAACAAAAGATGGAAAAAGGGATAATACTAGACCAGTTGCTCCTCTTAACTATGTATCAATATCAAAAGAAGATGCTGCTTCCCATGTTTCTGCTACTGAACCAATCCCAACATCACCCTAG 1761 0.427 MAATDGQNPLLDETTCGSLLHKLQEIWDEVGESDEERDKMLLQIEQECLDVYKRKVEMAAKSRAQLLQSLSDAKLELSSLLLALGENSLTGMPDKTSGTIKEQLAAIAPILEQLWQQKEERVKEFSDVQLQIEQICGEITGDLNPDQTGSGSFTVDESDLSLKKLDEYQSQLQELQREKSERLHKVLEYVSTVHDLCAVLGMDFFSIVTEVHPSLNDAIGVHSKSISNGTLAKLAKTVSALKEDKKQRLHKLQELASQLIDLWNLMDTPVEERRLFDHVTCNISASVDEVTVPGALALDLIEQAEVEVERLDQLKASKMKEIAFKKQDELEAIYARAHVEINPEAARGNILSLINSGNIEPSELLTDMDKQIAAAKEEALSRKEILDKVEKWMSACEEESWLEDYNRDENRYSASRGAHVNLKRAEKARILVSKIPALVDTLVAKTRAWEEVTNMSFTYDGVPLLAMLDEYAMLRQEREEEKRRMRDQKKYHEQQPTDQESLFGSRPTPARPLGNKKVVGPRLNGGPNGTPNRRLSLNAHQNGSRSTTKDGKRDNTRPVAPLNYVSISKEDAASHVSATEPIPTSP* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02567 586 MobiDBLite consensus disorder prediction 479 586 - -
Lapu6g02567 586 MobiDBLite consensus disorder prediction 570 586 - -
Lapu6g02567 586 Coils Coil 242 262 - -
Lapu6g02567 586 Coils Coil 464 495 - -
Lapu6g02567 586 Coils Coil 158 185 - -
Lapu6g02567 586 Gene3D - 372 505 - -
Lapu6g02567 586 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 12 573 IPR007145 GO:0000226|GO:0008017
Lapu6g02567 586 Coils Coil 301 321 - -
Lapu6g02567 586 FunFam 65-kDa microtubule-associated protein 6 372 505 - -
Lapu6g02567 586 MobiDBLite consensus disorder prediction 479 496 - -
Lapu6g02567 586 MobiDBLite consensus disorder prediction 529 545 - -
Lapu6g02567 586 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02567 Lapu-Chr6 25669790 25675136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02567 13 547 EF-hand Containing Proteins AT5G62250 42.804 5.99e-124 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02567 K16732 - cave:132173906 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02567 6 25669790 25675136 Lapu6g02567 6 25669790 25675136 ECH
Lapu6g02567 6 25669790 25675136 Lapu6g02567 6 25669790 25675136 PCT