Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02566 ATGGGAGACAATGTTGTAGTGTCCAACATGGAGCTTGAGAGATTGCTTAGCATGAAAGGAGGCAAAGGTGAAGGAAGCTATGCCAACAATTCCCAAGCTCAGGCCATACATGCCAAGTCCATGCATCATCTTCTCAAAGAAGCCCTAGATGGAGTTCAACTTCAAGACCCTAACATCCCATTTGTGGTTGTGGATTTGGGGTGTTCATGTGGCAGCAACACCATCAATGTGGTGGATGTGATCATCAAGCACATCATCAAACGCTATGAAGCCTTAGGATTAGAATCTCCTGAGTTTTCTGCTTTTTTCTCAGACCTTCCTAGCAATGACTTCAACACCCTCTTCCAGCTTCTTCCTCCTTTAGCCAACTATGGAGTTAGCATGGAGGAGTGCCTTGCTGCCAACAACCACCGTTCCTACTTCGCCGCCGGCGTCCCCGGCTCCTTCTACCGGAGACTTTTTCCGGCAAGGTTCATTGATGTTTTCCACTCAGCCTTTTCCCTGCATTGGTTATCTCAGGTACCAGAATCTGTCATGGACAAGAGGTCAAGTGCATACAACAAGGGGAGGGTGTTCATCCATGGTGCTAATGAGATCACAGCAAATGCTTACAGAAAACAATTCCAAGCAGACTTGGCAGGATTCTTGAGCTCAAGGTCTGTGGAATTGAAGAGAGGGGGGTCCATGTTCTTGGTTTGCTTAGGCAGAACTTCTGTGGACCCCACAGACCAGGGTGGAGCTGGCCTCCTATTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGATTAATTAGCAGTGAGAAAAGAGACAGTTTCAACATTCCAGTTTATGCACCAAGCCTGCAAGACGTTAAGGAGGTGGTTGAATCTAATGGTTCATTTGCCATGAACAAACTTGAGGTGTTTAAAGGGGGAAGCCCTCTTGTGGTGAACCAGCCAGGTGATGCTAGTGAAGTTGGAAAGGCCCTTGCCAACACCTGCAGGAGTGTGTCTGGTGTCCTTGTTGATGCTCACATTGGTGAAAAGCTTAGTGAGGAACTGTTCCTGAGAGTGGAACGTAGAGCCACAAGCCATGGCAAAGAGTTATTAGAGCAATTACAGTTCTTTCACATAGTTGCATCCCTTTCTTTTGCTCAATGA 1152 0.4722 MGDNVVVSNMELERLLSMKGGKGEGSYANNSQAQAIHAKSMHHLLKEALDGVQLQDPNIPFVVVDLGCSCGSNTINVVDVIIKHIIKRYEALGLESPEFSAFFSDLPSNDFNTLFQLLPPLANYGVSMEECLAANNHRSYFAAGVPGSFYRRLFPARFIDVFHSAFSLHWLSQVPESVMDKRSSAYNKGRVFIHGANEITANAYRKQFQADLAGFLSSRSVELKRGGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISSEKRDSFNIPVYAPSLQDVKEVVESNGSFAMNKLEVFKGGSPLVVNQPGDASEVGKALANTCRSVSGVLVDAHIGEKLSEELFLRVERRATSHGKELLEQLQFFHIVASLSFAQ* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02566 383 Gene3D - 16 362 IPR042086 -
Lapu6g02566 383 Pfam SAM dependent carboxyl methyltransferase 59 379 IPR005299 GO:0008168
Lapu6g02566 383 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 17 361 IPR005299 GO:0008168
Lapu6g02566 383 Gene3D Vaccinia Virus protein VP39 30 309 IPR029063 -
Lapu6g02566 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 380 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02566 Lapu-Chr6 25657011 25661375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02566 K18848 - gmx:100801476 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02566 6 25657011 25661375 Lapu6g02566 6 25657011 25661375 ECH
Lapu6g02566 6 25657011 25661375 Lapu6g02566 6 25657011 25661375 PCT