Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02564 ATGGCATCCTCTATTCTTTTCTCTGTCTTGTGCCTTCTGTTGGTTTCGGCATGTGGTTATGTGCAACCCCTTGAAGAGGGTTTCATCTCTGGGGTATTATCTGACACGGGTCTTGAATATGCCAAGGAGTTGTTGATAGAGAAGGGTATTGCTTCCATTGTTAGGCTTCAGCTGCCAGAGATTGAGAATTCTGCCCAAGTTGCTCTTGTTGGAAATGCTAAAGTGGTTCTTTCTGACATCACAATTGAGGATGTTCAAGTCAATTCTTCATCTGTTAAGACTGGAGAGAATGGTATTGTTCTTGTTGTTTCTGGTGCCATTGTTAATTTAAGTATGAGGTGGAGGTACACTGTAAGCTCTTGGTTAATTCCAATTGGAATTTCGGATAAAGGAACTGCTTCAGTGAAGGTTACAGGTATGCAAGTGGGGCTTACAATAAATTTAAGGAACCAAGAAGGAACCATGAAGTTGTCTCTCGTAGATTATGGATGTTATGTGGGAGACTTGTCTATAAAGTTGAACGGAGGAGCATCTTGGCTTTATCAACTGCTAGTAGATGCTTTTGAAGGGAATATAGCATCTGCTGTTGAAGAGGGAATTTCAGAGAAAATAAAAGAAGGGATAGTGAAGCTTGACAACTTTTTGGAATCTCTTCCAAAGAAGATTTCACTAGACAAAACTGCTACACTAAATGTTTCTTTTGTTGGCAATCCTGTGTTGAGCAGTTCCTCCGTCGCAATTGCAATTAACGGTTTATTCACAGGGAAAAATGAAGTCTTACTACCTCAAGGTTACCACCAGAAAAAATTGAACATTTCTGCTGCCTGTGGTGGTTTACCAAAGATGATAAAAGTATCAATACATGAAAATGTGTTCAAATCCGCTTCCCAAGTTTACTATAATGCAGGTAAAATGCAATTGATTGTTGATGAACTACCTGATCAGGCCATTTTGAACACTGCTGAATGGAGATTCATAGTTCCCCAATTATACAGGCGATATCCAAATGATGACATGCAGCTTAATATCTCTGCATCTTCTCCACCAGTTATACAAGTGACATATCAAGATGTTGGTGCAACTATTTTTGTAGATATAACAATTGATGTTCTGGAAGATTTTGAAGTCATACCTGTTGCATGCATCTCAGTGGAAATTAGTGCTTCATGTGCTGTAGAAATTGTAGGAAATGACATTGTTGGTAGGCTCACATTACAGGAATTTTCTACATACTTGAAATGGAGCAAAATAGGGAAATTGCACATTCATCTGATTCAGTCACTGATGTCAAGTGTCCTCAAAACTGTTGTCCTTCCATACTTGAACTTCAAATTAAAGAGAGGATTCCCATTGCCAATTATTGATGGTTATGGCTTTCAGAATGCTAATATCTTGCACAATCATCCATGGATTGAAGTGTGTAGTGATGTGTCCTTCTTCGAGGATTATTAA 1452 0.3864 MASSILFSVLCLLLVSACGYVQPLEEGFISGVLSDTGLEYAKELLIEKGIASIVRLQLPEIENSAQVALVGNAKVVLSDITIEDVQVNSSSVKTGENGIVLVVSGAIVNLSMRWRYTVSSWLIPIGISDKGTASVKVTGMQVGLTINLRNQEGTMKLSLVDYGCYVGDLSIKLNGGASWLYQLLVDAFEGNIASAVEEGISEKIKEGIVKLDNFLESLPKKISLDKTATLNVSFVGNPVLSSSSVAIAINGLFTGKNEVLLPQGYHQKKLNISAACGGLPKMIKVSIHENVFKSASQVYYNAGKMQLIVDELPDQAILNTAEWRFIVPQLYRRYPNDDMQLNISASSPPVIQVTYQDVGATIFVDITIDVLEDFEVIPVACISVEISASCAVEIVGNDIVGRLTLQEFSTYLKWSKIGKLHIHLIQSLMSSVLKTVVLPYLNFKLKRGFPLPIIDGYGFQNANILHNHPWIEVCSDVSFFEDY* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02564 483 Pfam LBP / BPI / CETP family, N-terminal domain 37 209 IPR017942 GO:0008289
Lapu6g02564 483 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 248 479 IPR017943 GO:0008289
Lapu6g02564 483 PANTHER OS06G0309200 PROTEIN 3 481 IPR045897 -
Lapu6g02564 483 PIRSF Lipid_binding_protein 6 482 IPR030675 GO:0005615|GO:0008289
Lapu6g02564 483 CDD BPI1 33 254 - -
Lapu6g02564 483 FunFam phospholipid transfer protein-like 36 216 - -
Lapu6g02564 483 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 33 241 IPR017943 GO:0008289
Lapu6g02564 483 Gene3D - 36 216 - -
Lapu6g02564 483 Gene3D - 33 464 - -
Lapu6g02564 483 Pfam LBP / BPI / CETP family, C-terminal domain 278 465 IPR001124 GO:0008289
Lapu6g02564 483 SMART bpi2_2 277 482 IPR001124 GO:0008289
Lapu6g02564 483 SMART bpi1_3 33 258 IPR017942 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02564 Lapu-Chr6 25630169 25634960 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02564 K05399 - gmx:100815362 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02564 6 25630169 25634960 Lapu6g02564 6 25630169 25634960 ECH
Lapu6g02564 6 25630169 25634960 Lapu6g02564 6 25630169 25634960 PCT