Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02550 ATGTGGCACTTCATGGCTCTCTCTCGTGTACTTGCTGTACTCATTCTTCAGTACTCATTGGTAGCACTGGTTTCTTCAGCTGGACCACCAAGTGGCTGGAAAACATTGCAAGGATCTCCACCACTGGTCATAGCACGTGGCGGGTTTTCAGGGATATTTCCAGATTCAAGTTCACTTGCCTACAGTTTGGCACTTAACACTAGTAGCCCAAATGTGATTCTATGGTGTGATGTGCAATTAACGAAGGATGGAACTGGGATTTGTTTCCCAGAGCTCAAGCTGGACAATGCCACTGACATTTCAGTTGTTTACCAAGGCAAGGCAAAGCGTTACTTTGTTAATGGGGTCTTAACCGGGGGATGGTTTTCTGTAGATTACAACTTCAAAGAACTAGCAAATGTCTCTCTTCTTCAGGGAGTGTACTCTCGGACTAATAGGTTCGATGGCAACAAGCTTCCCATTCTCCATGTTGAAGAAGTAGCTAACTTAATAAAATCACCATCTACAGGCCTGTGGTTAAATATTCAGCATGATTCCTTCTTCAAGCAACAGAATTTGAGTGTAGAAACTTTTTTACGATCTCTCGCTGCTAAAGGGGTACCTGTCAGTTACATTTCATCACCTGATGTGGATTTCTTAAGAAGAGTTAAATCAATCTTTGGTCCTCGAACAACCAGTTTGATCTTCAGGGTTCTAGAGCAGTCTATGATTGAACCTACAACCAATCAGTCTTATGGTGAACTCTTGAAAAATCTTGCGCAAATCAAGACATTTGCTTCAGGAATTCTTGTTCCCAAGGGATATATCTGGCCTGTAGACTCAAGCCTTTATCTACAACCCCACACCTCTCTTGTCTCAGATGCTCACAAGGAAGAGTTGCAAGTTTTTGTATCAGACCTTATCAATGATGTTCCATTTAGCTACAATTTCAGTTATGATCCTGTGGCCGAGTGTCTATCTTTCTTTAATGTTGGTGATCTCTCTGTTGATGGTGTGTTGTCTGACTTCCCAGTTACTCCATCTGCAGCCATAACATCCCATTGA 1044 0.4234 MWHFMALSRVLAVLILQYSLVALVSSAGPPSGWKTLQGSPPLVIARGGFSGIFPDSSSLAYSLALNTSSPNVILWCDVQLTKDGTGICFPELKLDNATDISVVYQGKAKRYFVNGVLTGGWFSVDYNFKELANVSLLQGVYSRTNRFDGNKLPILHVEEVANLIKSPSTGLWLNIQHDSFFKQQNLSVETFLRSLAAKGVPVSYISSPDVDFLRRVKSIFGPRTTSLIFRVLEQSMIEPTTNQSYGELLKNLAQIKTFASGILVPKGYIWPVDSSLYLQPHTSLVSDAHKEELQVFVSDLINDVPFSYNFSYDPVAECLSFFNVGDLSVDGVLSDFPVTPSAAITSH* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02550 347 ProSiteProfiles GP-PDE domain profile. 41 344 IPR030395 GO:0006629|GO:0008081
Lapu6g02550 347 CDD GDPD_SHV3_repeat_1 41 343 - -
Lapu6g02550 347 Gene3D Phosphatidylinositol (PI) phosphodiesterase 40 343 IPR017946 GO:0006629|GO:0008081
Lapu6g02550 347 SUPERFAMILY PLC-like phosphodiesterases 40 340 IPR017946 GO:0006629|GO:0008081
Lapu6g02550 347 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 11 345 - -
Lapu6g02550 347 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 39 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02550 Lapu-Chr6 25477357 25484532 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02550 6 344 Receptor kinase-like Gene Family AT4G26690 53.372 1.94e-120 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02550 - - gmx:100813869 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02550 6 25477357 25484532 Lapu6g02550 6 25477357 25484532 ECH
Lapu6g02550 6 25477357 25484532 Lapu6g02550 6 25477357 25484532 PCT