Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02531 ATGGATTCCCCACAATCTGTTGTGTCACCCTTCAGGAGCTCAGTTTTCGGTGAGGGTGAGAAGCACAAGTCTGAAGTTTTCTCGGGAAATTCTAGTCCCTTGTCCAAGGACATTGAAGTGAATGGCAAGGAAGTTGTCATGTCAAATGTAGAGGAGTCCCTTGGCGTGCTTGATGTTTACATACATCAGGCCAGGGACATTCAAAACATTTGCATATACCACAAGCAAGATGTTTACGCTAGGATTTGCCTGACAAGTAATCCTGAGAACACCGTGTCTACGAAAACCATCAATGGAGGAGGAAGGAACCCTGTGTTTAATGAGAATCTTCAAGTCAATGTTAGAACTGTTGATGCTTCTCTCAAGTGTGAGATATGGATGCTTAGCAGGGTGAAGAATTATCTTGAAGACCAGTTGCTTGGTTTTGCTTTGGTGCCTTTGTCTGAAGTTCTAGTCCAGAATGGGAAACTGGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTATTCCATTCTCCTTCAGGTTTTGTTCAGTTGACACTTTCTTACACTGGTGTTTCACCTGATGTTATGGCAATTTCTGCAATGCCAAGCAAGGTGGCCACAGATGCTCCTGTGCAGGATTCGGAAACATCCGAATCTCTGGCCCAGGAATTAGACAAAATTGAGTTCCCGGATCCGAAGATTGTGAATGAAGACCACTTGATGGTTTCAGAATACTTTGGCATTCCCTGTGAGGAGACTCAGTGCTCTGATAGCTTGGCTACTTCTGATGCCGAAAATCGAAGTTGCGAAGCCGGTGTTCGGCTTGTGGAAAGCTTCTCAGCATGCAGTGGTGATTCTGTTCAGCCTCCCAAGGTTGATTCCCCACCCAGCAGTGTGTCAACAAATGGGGTTTCTTCCCCTTCTGCGCCTGCAAGCTCAGAATCATCTGATGCTGCTGCTTCTAAGTCTCCCGTTCAGGAGCAAGTTTCAGGCACCATAGAGGACAAAAATGTGGATGTCAAAGATGGTGAGAGTGATTCCTCAAGTGGAGTTCCTAGTGACTCATTCCCCAAGCCTATTGTTACTGTGAACATTGAGCCTGAGCCAAAGGTGGTGCAGCAGGATATAGTAGACATGTACATGAAAAGCATGCAGCAGTTCACTGAGTCACTAGCAAAAATGAAGCTCCCTATGGACTTTGAAAGTGAACCAACTAGTTCAGGAAATTCAACCACTGAGCAAAAGCTACAGCCGTCAAAGAGCAATAATTCCCGTGTGTTTTATGGTAGCAGAGCTTTCTTCTGA 1287 0.4522 MDSPQSVVSPFRSSVFGEGEKHKSEVFSGNSSPLSKDIEVNGKEVVMSNVEESLGVLDVYIHQARDIQNICIYHKQDVYARICLTSNPENTVSTKTINGGGRNPVFNENLQVNVRTVDASLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVQNGKLEKEFSLSSTDLFHSPSGFVQLTLSYTGVSPDVMAISAMPSKVATDAPVQDSETSESLAQELDKIEFPDPKIVNEDHLMVSEYFGIPCEETQCSDSLATSDAENRSCEAGVRLVESFSACSGDSVQPPKVDSPPSSVSTNGVSSPSAPASSESSDAAASKSPVQEQVSGTIEDKNVDVKDGESDSSSGVPSDSFPKPIVTVNIEPEPKVVQQDIVDMYMKSMQQFTESLAKMKLPMDFESEPTSSGNSTTEQKLQPSKSNNSRVFYGSRAFF* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02531 428 MobiDBLite consensus disorder prediction 276 356 - -
Lapu6g02531 428 Gene3D C2 domain 50 211 IPR035892 -
Lapu6g02531 428 PANTHER EXPRESSED PROTEIN 1 428 - -
Lapu6g02531 428 MobiDBLite consensus disorder prediction 276 327 - -
Lapu6g02531 428 Pfam C2 domain 55 162 IPR000008 -
Lapu6g02531 428 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 185 IPR035892 -
Lapu6g02531 428 CDD C2 57 163 - -
Lapu6g02531 428 MobiDBLite consensus disorder prediction 396 422 - -
Lapu6g02531 428 ProSiteProfiles C2 domain profile. 30 161 IPR000008 -
Lapu6g02531 428 SMART C2_3c 56 159 IPR000008 -
Lapu6g02531 428 MobiDBLite consensus disorder prediction 392 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02531 Lapu-Chr6 25300703 25303541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02531 - - gmx:100796499 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02531 6 25300703 25303541 Lapu6g02531 6 25300703 25303541 ECH
Lapu6g02531 6 25300703 25303541 Lapu6g02531 6 25300703 25303541 PCT