Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02530 ATGGCATCAAACCAGATCCTGAGAGAACTACAATGGGCTCAGCAAGGAATCAGATCAGAGGGCCTAAATCTGCACAGTATTTCCTTCTACCTCTCCCAACCAACTTCAGGTTGTTATCAAGAAACAGACAACTCCATGAGCATAAACATTTCCAAGGAAAACTTTCCATTCTTTTCCACCCTCTTGACAACTCTAGCAGCACCAGGGAGCTACAACTCCTCCTTGAGAAACTTGGAGTTCCACAGAGTTGAATGGGACTCACAACAGGTAAGACATCTTGGCACCTTGCTGGGGAATAACCAAAATGTACAACATTTGGTTTTTAGAAGAAACAGGTTCAATGAAAAAAGCCTATCAGACCTTTCTGACGTTCTGAAGACAAATAAACTGATCAAAGAGATCATGCTTTCAGAATCAGGCATAGGGTCTGTTGGAGCTGGACTCATTGCTTCTGCTCTTATGGTGAACGACTGTTTGGAGGAGCTGCAGATATGGGAAGACTCAATAGGGTCAAGAGGTGCTGAGGAGCTTTCGAAGATGATTGAAGTTAACTCAACTCTTAAACTGTTGACAATTTTTGACTCAAATGCCATCACAGCTACACCTCTTATATCTGCGGTTTTGGCAAGGAACAGAAAAATGGAAGTTCATATTTGGAGTGGGGAGAATAGGGAAAAGAGTTCCAAGGTTGTTGAGTTTGAACCTGAGAACAGAACACTTAGAATTTACAAGCTTAACCTCTCTGGTACTTGTAGAGTTACCTGCTCTTTAGGGATGAACTTTACCGTGAAGTCCCTTGACATGACCGGAGTAAGGCTAAAATCCCGGTGTGCCAAGGAATTTAGGTTGGTTTTGGAACAAAACCAGACCCTCAAAGAGGTAAATTTGTCTAGTACATGCCTTAAAGACAAGGGCATTTTGTATATTGCAGCTGGCCTCTTCAAAAACAGAACTCTTCAAACCTTACACCTGAGTGGAAATTGGTTCAGTGGAATGGGTGTGGAGCATCTATTATGCCCTTTGAGTAGATTTTCAGCTCTTCAAATGCAAGCCAATACTACTTTGACATGTATTACTTTTGGAGGAGAAAAAACAAGAATAGGAAGGGATGGTCTAGCTGCTATTATACAGTTTCTTATAACAAATGAAACGGTGCGGCAGTTGGGAATTCACAATGATGAGAGTTTGAGATCAGATGACTTTGTCAAGATCTTCAAGAGTTTGCAGAAGAATGCTAGCTTGAAATGCTTGTCTCTTCAAGGATGCAAACGTGTGGAGGGAGAGATATTGCTGCAGACTATTATGGAGACACTGCAGATAAATCCTTGGATTGAAGATATTGATCTCTCCAGAACACCTTTACAAAACTCTGGAAAGACTCAGCGGATCTATCAGAGATTAGGCCAGAATGAGAAGACTGAACCAGATATGGATTCGGTCAAGGACATGCCTCTAACAGAACCCAAGAGTTGCAGAGTTTTCTTTTGTGGCCAAGAATGTGCAGGCAAAACCGCACTTTGTCATTCAATATCTCAAATTTTTTCTGCTTCGGCGCTTCCCTACTTGGATCAAGTCAGAACAATGGTGAACCCAGTGGAGCAGGCTGTCAAATCAGTAGGAATGAAGATAAAAACGTTCAAGGATGAGGATACAAGGATTTCAATATGGAATCTTGCTGGTCATCACGAGTTTTTATCTCTCCATGATCTTATGTTCCCAGGGCATGGGAGTGCATCATTTTTCATCATCATATCAAGTTTATTCAGGAAACCAAGTAACAAAGAACCTAAAAGCTCAACAGAAATTGAAGAGGACCTGCAGTATTGGCTCAGGTTCATAGTTTCCAACTCTAAAAGAGCAATACAACAATGCATGCTACCAAGTGTTGCTGTTGTTCTCACACACACTGACAAAATCAACCAACCATCACAAAATTTGCAGCGCACAGTAGATTCAATTCAGAGACTTAGGGACAAGTTTCAAGGCTTTGTTGACTTTTACCCAACTGTATTCACAGTTGATGCAAGATCATCAGCATCAGTTAGTAAACTCACTCATCATATCCGAAAGACAAGCAAGACAATTCTCCAAAGAGTGCCACGAGTTTATCAACTTTGCAATGATCTGATACAGATTTTATCAGACTGGAGATCTGAGAACTACAACAGGCCAGCAATGAAGTGGAAGGAATTTGGTGAACTATGCCAAGTGAAAGTCCCAACTTTGAGAATTCGATCAAGACATGACAACAAAGAGAAGGTGGAAATGAAGAGAAGAGCTATTGCTACCTGTCTTCATCACATTGGTGAAGTGATTTATTTTGATGAGTTGGATTTTCTAATTTTAGATTTTGAGTGGTTCTGTGGTGAAGCCCTTGGTCAGCTCATAAAGTTGAATGTTAGGAAGCAACACTCCTCAGAAAACAATGGATTTATTAGCAGGAAGGAATTAGAAAAGATCTTAAGAGGAAGTTTGCAGAGCCCCATTCCTGGTATGGGTTCAAAGGTGTTTGAGAATTTAGACGCAGGTGACCTTGTGAGGATGATGCTAAAGCTTGAACTTTGTTATGAGGAAGATCCATCAGATCCAAATTCTCTGCTATTGATTCCTTCCATTCTAGAAGAAGGGAGAGGCAAGCCTCAGAGGTGGCAGCTAAGCATGCCAGACTGTGTTTACGCAGGACGTCATCTTGAGTGTGATGATTCAAGCCACATGTTTCTAACTCCTGGTTTCTTCCCTCGTTTACAGGCAAGAGTGCACCTTCACAACAGAATAAAGGCTGTTAAGGATCAGCATGGTGCAACTTACAGTCTTGAAAAGTACCTTATTTCAATCAGCATTAATGGAATCTACATAAGAGTAGAACTTGGAGGACAGATGGGTTACTATATTGATGTCCTTGCATGTTCCACCAAAAACTTGACAGAAACTTTAAGAGTCATTCATCAAATTGTAATCCCCGCAATCCAAAGTGTTTGCCATGGGATCACCCTGACTGAGAATGTCTTGAGACCTGAATGTGTGAGAAAACTGACACCTCCTAGATACAGAAAAACTCAATTTGCTTCCCTGCAGCAACTGAAAGAAGCACTACTTTCACTTCCGGCAGAAAGCATGTATGATTATCAACACACATGGAGTCCAGTCCTAGACTCTGGTAGGCCTGTTCTCCAAGATGGATTTGATTTTGCACGAGACCTTTTATCTGATGATGACTTCCGGGAAGTGTTGCATCGAAGGTATAACGACCTTTACAATCTTGCACAAGAGCTGCAAGTTCCACCTGAAAATAACCCTGAAGGGCAAGGTCAATCTATAACCTTAAGAGATGAAGCTGCAAGGGTTGAACCAACCTTTGGTGGCATTGCAAAAGGGGTTGAAGAAGTTTTGCAAAGACTCAAGATTATTGAGCAAGAAATCAGAGACTTGAAACAGGAAATCCAGGGGCTGAGATATTATGAACATAGACTTCTCCTTGAGCTTCATCGCAAAGTGAACCACCTTGCAACCTTCAATGTCCAGGTTGAGGAGAGGAAAGTCCCCAACATGATATATTTTGTAAGGACAGAGAACTACACCAGGAGACTGGTCACCACCATGCTTTCTGGCATGAATGCTCTCCGGCTTCACATGTTATGCGAGTTCCGGGGACAAATGCATGTTGTTGAAGATCAGATGGGGTGTGAAATCATGCAAGTTGATAATGCTGCTGTGAAGTCTTTGGCTCCATACATGAAGAAATTCATGACATTGGTAACTTTAGCTCTTAAAATAGGAGCTCATCTTGCAGCTGGAATGGGGCAAATGATACCTGACTTGGGTAAGGAGGTGGCTCACTTGGCTGGCTCTTCAGTTCTCTGTGGTGCAGCTGGGGCAAGTGCAGCTGGCGTTTTAGGTGCTGCCGCTATGGGTCGTAGAAACAGGTCCATGGAAGGGTCAAGGGACATTCAACAAGACTTAAGAGCAGCACAACAATGGGTGGTTGATTTCTTAAGGGAGAGGAAGTGTTCCTCAGGGAAGGATATTGCAGAAAAGTTTGGACTGTGGCGAGTCAGGTACAGGGACAACGGTCAAGTTGCATGGATATGCAGGAGGCACATGTATGCAAGATCTGCAGAGATAATTGAAGTACCAATTTGA 4140 0.4229 MASNQILRELQWAQQGIRSEGLNLHSISFYLSQPTSGCYQETDNSMSINISKENFPFFSTLLTTLAAPGSYNSSLRNLEFHRVEWDSQQVRHLGTLLGNNQNVQHLVFRRNRFNEKSLSDLSDVLKTNKLIKEIMLSESGIGSVGAGLIASALMVNDCLEELQIWEDSIGSRGAEELSKMIEVNSTLKLLTIFDSNAITATPLISAVLARNRKMEVHIWSGENREKSSKVVEFEPENRTLRIYKLNLSGTCRVTCSLGMNFTVKSLDMTGVRLKSRCAKEFRLVLEQNQTLKEVNLSSTCLKDKGILYIAAGLFKNRTLQTLHLSGNWFSGMGVEHLLCPLSRFSALQMQANTTLTCITFGGEKTRIGRDGLAAIIQFLITNETVRQLGIHNDESLRSDDFVKIFKSLQKNASLKCLSLQGCKRVEGEILLQTIMETLQINPWIEDIDLSRTPLQNSGKTQRIYQRLGQNEKTEPDMDSVKDMPLTEPKSCRVFFCGQECAGKTALCHSISQIFSASALPYLDQVRTMVNPVEQAVKSVGMKIKTFKDEDTRISIWNLAGHHEFLSLHDLMFPGHGSASFFIIISSLFRKPSNKEPKSSTEIEEDLQYWLRFIVSNSKRAIQQCMLPSVAVVLTHTDKINQPSQNLQRTVDSIQRLRDKFQGFVDFYPTVFTVDARSSASVSKLTHHIRKTSKTILQRVPRVYQLCNDLIQILSDWRSENYNRPAMKWKEFGELCQVKVPTLRIRSRHDNKEKVEMKRRAIATCLHHIGEVIYFDELDFLILDFEWFCGEALGQLIKLNVRKQHSSENNGFISRKELEKILRGSLQSPIPGMGSKVFENLDAGDLVRMMLKLELCYEEDPSDPNSLLLIPSILEEGRGKPQRWQLSMPDCVYAGRHLECDDSSHMFLTPGFFPRLQARVHLHNRIKAVKDQHGATYSLEKYLISISINGIYIRVELGGQMGYYIDVLACSTKNLTETLRVIHQIVIPAIQSVCHGITLTENVLRPECVRKLTPPRYRKTQFASLQQLKEALLSLPAESMYDYQHTWSPVLDSGRPVLQDGFDFARDLLSDDDFREVLHRRYNDLYNLAQELQVPPENNPEGQGQSITLRDEAARVEPTFGGIAKGVEEVLQRLKIIEQEIRDLKQEIQGLRYYEHRLLLELHRKVNHLATFNVQVEERKVPNMIYFVRTENYTRRLVTTMLSGMNALRLHMLCEFRGQMHVVEDQMGCEIMQVDNAAVKSLAPYMKKFMTLVTLALKIGAHLAAGMGQMIPDLGKEVAHLAGSSVLCGAAGASAAGVLGAAAMGRRNRSMEGSRDIQQDLRAAQQWVVDFLRERKCSSGKDIAEKFGLWRVRYRDNGQVAWICRRHMYARSAEIIEVPI* 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02530 1379 Coils Coil 1126 1153 - -
Lapu6g02530 1379 Gene3D Ribonuclease Inhibitor 228 346 IPR032675 -
Lapu6g02530 1379 Gene3D Ribonuclease Inhibitor 347 478 IPR032675 -
Lapu6g02530 1379 Gene3D Ribonuclease Inhibitor 49 218 IPR032675 -
Lapu6g02530 1379 SMART LRR_RI_2 288 315 - -
Lapu6g02530 1379 SMART LRR_RI_2 316 343 - -
Lapu6g02530 1379 SMART LRR_RI_2 128 155 - -
Lapu6g02530 1379 SMART LRR_RI_2 156 183 - -
Lapu6g02530 1379 Gene3D - 490 694 IPR027417 -
Lapu6g02530 1379 PANTHER PROTEIN TORNADO 1 1 1378 - -
Lapu6g02530 1379 Pfam Leucine Rich repeat 315 337 IPR001611 GO:0005515
Lapu6g02530 1379 Pfam Leucine Rich repeat 287 310 IPR001611 GO:0005515
Lapu6g02530 1379 SUPERFAMILY RNI-like 71 215 - -
Lapu6g02530 1379 Pfam C-terminal of Roc, COR, domain 755 920 IPR032171 -
Lapu6g02530 1379 SUPERFAMILY RNI-like 243 458 - -
Lapu6g02530 1379 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 488 691 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02530 - - gmx:100817598 2496.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02530 6 25294515 25300571 Lapu6g02530 6 25294515 25300571 ECH