Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02527 ATGGAGACACTGAACACGATCTCAACAGCACTGAACCTGGTCGATTCCAAGAAAGAGAATCTGAAGAAAGCATTCGATGATCTCCAATCCCTTCTCTCTCCTCTTCCTCTTGCATGGTCAGACCTCGATTCTCACTTCACCTCGCTCCACCACTCTCTCTCCCACCGCCTCCAACTCCTCCAATCACAAACCCTAACCCCGATTCCCGACCCACCTGTCCAAACCCCTAATGAAGCGAATTTTTCATCAAACCCTAATGACCCATCATCGAATATTACCGAATCTTCACCTGGGGGGGTATCCCCACAAAACGACACCTTTCCGGGCTCGGTTACGCCAAGGAACGAATTGATCGTTCTATGCGAGAAAATGGACGGCGTGGGGTTGAGGAATTACGTTAATGACCACTTTCTGGACAGGGACAGGGTTCAGGCGGAGCTTCCCGGCTCATTTCACCATGCGCCAGACGCGGGCGTGATGGTTCTGGAAGCGTTGGAGGGGTTTCATGGAGAGGGTAGTTGTAGTGGATTGAAGGAATGGGAATTGAGGAAAATGAGGAAGAGTTGTACTGTGTTGTTGAAGCAATTCAGGGTTGCCGGTATAAGTGTGAGTGGTGAGGCCGGTGCGAGAGCTGTGAAGTTGGCTCAGGCATGGAAAGAGAGGTTGGTGGGTGATGATAACAATGTGTTTGGAGCTTTGGGGCTTTTGCATTTGATTGCTGCATTTGGTTTGGTCTCTGAATTCAGCTTGGATGATCTTGTTGACTTTTCGGTCGCGGCCCCCACCAATGACGAGTTCCCAGAGCTGTGCCGGGCGGTCGGGTTGACGGAGAAAGTTCCTGATATTGTTCAGAAACTTATAGATAAGGACAAACATATTCCAGCCGTCAAGTATATTCTTGAGTTTAATCTTGCTGATAAGATTCCACCTGTTCCTGTTTTGAAAGCTTGTGTGGATGAAGCCAAGAAACTTGCTGAAAATCTTTCTGTGGAAGGAAAGTCATCTAGTGAGAGTACTGCTAAAGAAATTCATACACTGAAATCGGTGATCAAGATTATTGAGAATTATAAGCTCGAATCTGAATACCTACGAACTAGCCTTGAGCAGCGTATAGAGCAATTAAAGAGGCAGAAGACGAATAATAAACGTGCTGCACCAGCCCCTGCTGCAAAGTTTCAGCATAAACAGCATCAACAGCAACAACAACAAAAGAGGAATATGCAGAAGCAGCAGCAGACTGGGATCAAGCATCCTCGATCATCTGCTCCAGTTGGTCCTGCAGCTGTCCTGAAGAATGTCAATTTGGCAATGCACCACTACCAGCAACCTCTGGTCCGTCCATCAGGTTTGTTTCCAGAGCATCCAATTCCCTACATGGGCTCGCCAGCCATGCCACTTGGCATGATGGCTTCTACCGCAAACTTTCTTCATTATGCAGGTCCTTCAGCTGGACCTTATGGCCATGATGGTGTCCCAATGGGTCCCAGTGGCAACCCCAATCTTAGTGGTTCTCATCTAAGCTCATCAGAGCCACATGTGCCCACTGGTGGTTATTATGATAGAACCTCTACTTATGGTGGTATTGGTCGGCAACATCATTACCAAGCGTCTTATTACCCTCAATAG 1626 0.4779 METLNTISTALNLVDSKKENLKKAFDDLQSLLSPLPLAWSDLDSHFTSLHHSLSHRLQLLQSQTLTPIPDPPVQTPNEANFSSNPNDPSSNITESSPGGVSPQNDTFPGSVTPRNELIVLCEKMDGVGLRNYVNDHFLDRDRVQAELPGSFHHAPDAGVMVLEALEGFHGEGSCSGLKEWELRKMRKSCTVLLKQFRVAGISVSGEAGARAVKLAQAWKERLVGDDNNVFGALGLLHLIAAFGLVSEFSLDDLVDFSVAAPTNDEFPELCRAVGLTEKVPDIVQKLIDKDKHIPAVKYILEFNLADKIPPVPVLKACVDEAKKLAENLSVEGKSSSESTAKEIHTLKSVIKIIENYKLESEYLRTSLEQRIEQLKRQKTNNKRAAPAPAAKFQHKQHQQQQQQKRNMQKQQQTGIKHPRSSAPVGPAAVLKNVNLAMHHYQQPLVRPSGLFPEHPIPYMGSPAMPLGMMASTANFLHYAGPSAGPYGHDGVPMGPSGNPNLSGSHLSSSEPHVPTGGYYDRTSTYGGIGRQHHYQASYYPQ* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02527 541 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 111 406 - -
Lapu6g02527 541 Pfam Frigida-like protein 111 385 IPR012474 -
Lapu6g02527 541 MobiDBLite consensus disorder prediction 491 524 - -
Lapu6g02527 541 MobiDBLite consensus disorder prediction 65 111 - -
Lapu6g02527 541 MobiDBLite consensus disorder prediction 377 425 - -
Lapu6g02527 541 MobiDBLite consensus disorder prediction 75 111 - -
Lapu6g02527 541 MobiDBLite consensus disorder prediction 393 418 - -
Lapu6g02527 541 Coils Coil 357 384 - -
Lapu6g02527 541 MobiDBLite consensus disorder prediction 497 511 - -
Lapu6g02527 541 Coils Coil 390 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02527 Lapu-Chr6 25241283 25244553 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02527 - - gmx:102669439 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02527 6 25241283 25244553 Lapu6g02527 6 25241283 25244553 ECH
Lapu6g02527 6 25241283 25244553 Lapu6g02527 6 25241283 25244553 PCT