Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02512 ATGAATGTTCTGGTTCTAGGGTGCTTTTTCACTTCCCCCTTATATAAGACTTCGCCTCTCACTCCCTCCTCAATCCAATTTACACCCATTCTCCTTCATCCCTCAAAGCTCCAACCTTTGCACGCAATTCACCTCTTCTCTCTCTCCATGGCCACTTGCGTTGACGCCACAACCCCTCTTTCTCGCAAGCCAAACGCTCCCCAATCCGATGACCATTCTTTCAATTACATCAAATGTTGCCGACCCACTTTCTCCGATCGCGTCCCCTGCATACCCATTTGCAAAAATCGGGAGATGGCCTTCTCACATGTGGAGGACTTGGACACACGTGTGGAGGATGGCCTTGGTGCTCTTGAGTTTGAGGCTGTTGATCTTTGGTTGAAAATTCAAGAGGAAGCGAGGTTGGATGTGGATCAAGAACCCATTTTGTCTGGCTACTATTTCAGTTCCATTTTGTCACACAAATCATTTGAGAGTGCCTTGGCCAACCAACTCTCCACCAATTTGAGCAGTTTGAGCCTTCCAAGTAGCACGCTTTTTGATCTTTTCTTGGGTGTTTTGATTGATGATGGTGGAGATGACATCATAGGTGCTGTGAAGGATGATTTGATAGCTGTTAAAGAGAGGGACCCTGCATGCATTAGTTATGTGCATTGTTTGTTAAATTTCAAAGGATTTCTTGCATGTCAGGCTCACAGGATTGCTCACAAATTGTGGCTTCAAGGGAGGAGGGTTCTGGCCCTGTTGATTCAGAATAGGGTGTCTGAGGTTTTTGCTGTGGATATTCATCCTGGTGCACAAATTGGACGTGGGATTTTGTTGGATCATGCTACTGGACTTGTGGTGGGAGAGACTGCAACTATTGGGAATAATGTCTCAATTTTGCATAATGTGACTTTGGGAGGGACTGGTAAGGCAAGTGGCGATAGACACCCTAAGATTGGTGATGGGGTGTTGATAGGTGCAGGGACCTGTATTTTGGGAAATATTAAGATTGGTGATGGGGCTAAGATTGGTGCTGGTTCTGTGGTGTTGAAGGATGTTCCACCAAGGACTACTGCAGTTGGAAACCCTGCTAGGTTGATCGGAGGGAAGGACAACCCTATTAAATTGGATAAGATGCCTAGTTTTACCATGGACCATACTTCATATATCTCTGAGTGGTCTGATTATGTTATCTAG 1182 0.4552 MNVLVLGCFFTSPLYKTSPLTPSSIQFTPILLHPSKLQPLHAIHLFSLSMATCVDATTPLSRKPNAPQSDDHSFNYIKCCRPTFSDRVPCIPICKNREMAFSHVEDLDTRVEDGLGALEFEAVDLWLKIQEEARLDVDQEPILSGYYFSSILSHKSFESALANQLSTNLSSLSLPSSTLFDLFLGVLIDDGGDDIIGAVKDDLIAVKERDPACISYVHCLLNFKGFLACQAHRIAHKLWLQGRRVLALLIQNRVSEVFAVDIHPGAQIGRGILLDHATGLVVGETATIGNNVSILHNVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKDNPIKLDKMPSFTMDHTSYISEWSDYVI* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02512 393 Pfam Bacterial transferase hexapeptide (six repeats) 311 345 IPR001451 -
Lapu6g02512 393 Pfam Serine acetyltransferase, N-terminal 125 231 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lapu6g02512 393 Gene3D Hexapeptide repeat proteins 261 382 - -
Lapu6g02512 393 FunFam serine acetyltransferase 1, chloroplastic 110 260 - -
Lapu6g02512 393 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 320 348 IPR018357 GO:0016740
Lapu6g02512 393 PANTHER SERINE ACETYLTRANSFERASE 121 393 - -
Lapu6g02512 393 NCBIfam serine O-acetyltransferase 199 360 IPR005881 GO:0005737|GO:0006535|GO:0009001
Lapu6g02512 393 SUPERFAMILY Trimeric LpxA-like enzymes 125 363 IPR011004 -
Lapu6g02512 393 Gene3D serine acetyltransferase, domain 1 117 260 IPR042122 -
Lapu6g02512 393 SMART SATase_N_2_a 125 231 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lapu6g02512 393 FunFam Serine acetyltransferase 261 386 - -
Lapu6g02512 393 CDD LbH_SAT 258 358 IPR045304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02512 Lapu-Chr6 25054249 25055712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02512 125 381 Miscellaneous Gene Families AT2G17640 53.696 3.62e-87 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02512 K00640 - gmx:606507 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02512 6 25054249 25055712 Lapu6g02512 6 25054249 25055712 ECH
Lapu6g02512 6 25054249 25055712 Lapu6g02512 6 25054249 25055712 PCT