Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02489 ATGTACCACCACCTCCGTCCGGCGAATCTGCCGGCGCTAGCGGCGGCGCTCCTCCTCCTCGCCACCCTCTCCCAAGCGCACAACATCACGCGCATCCTCGCGCAGCACCCGGAGTTCTCCACCTTCAACCACTACCTCACCCTCACGCACCTCGCCCCTGAAATCAACGGAAGAACCACCATCACCGTCTGCGCCGTTGACAACGCCGCCATGGACGACCTCCTCTCCAAGCACCCCTCCATCTACGTCGTCAAAAACATCCTCTCCCTTCATGTCCTCCTCGACTACTTCGGCGCCAAGAAGCTCCACCAGATCACTAACGGTACTGCCCTCGCCGCCACCATGTATCAGGCCACCGGAACCGCCCCGGGCTCCTCCGGTTTCGTCAACATCACCGACCTCCACGGCGGGAAGGTCGCATTCGGCGCCGAAAACAACGACGGAACCCTGACCTCCACTTTCGTGAAATCTGTCGAAGAAATCCCTTACAACATCTCCGTTATCCAGATCAGCAAAATTCTCCCCTCGGCCGCAGCGGAAGCCCCTGCACCCGCACCCGCGCAGCAAAACCTCACCGGCATTATGTCCAACCACGGTTGCAAAGTCTTCGCCGACACTCTTTCTTCCTTTGGCGAAGCGCTTTCCACCTTCAACGACAACCTCGACGGCGGATTAACCGTTTTCTGCCCCGTCGACGACGCCTTCAAAGCGTTCCTCCCCAAATTCAAAAACCTAACAGCTTCTGGCAAACTCGCGCTTCTCGAATTCCACGGCGTGCCGGTGTACCAATCCATTGCCACGCTAAAATCCAACAACGGACTTCAGAACACCTTGGCCACCGACGGAGCCAACAAATTCGACTTCACAGTACAAAACGACGGCGAAGAGGTCACTCTGAAGACGAAGCTCACCACGGCCAAGATCACCAACACCATAATCGACGAACAGCCTCTCGCGATTTTTGCTATCAATAAGGTGCTTCTCCCTAAAGAGTTGTTCAAGGGCGAGGCACCTGCTCCGGCGCCCGCTCCGGAGCCTTCTGCTGCCGACGCTCCTGCGCCGGCGAAGAAGGGGAAGAAGAAGAAGAAGGCTGCTGACGCGCCTGCCGCGGATGATGATTCCGACGCGCCGGCGGACTCCCCCGGGGACGCCGCCGATGACACCGCTGACGATAGTAACGGCGCCGTTATACTTAACGGCGGGAGGTATGGTAATGTTATTGTTGCCTTGGGTTTTGTTTTGGGGTTACCGTTAGTGCTGTGA 1263 0.5796 MYHHLRPANLPALAAALLLLATLSQAHNITRILAQHPEFSTFNHYLTLTHLAPEINGRTTITVCAVDNAAMDDLLSKHPSIYVVKNILSLHVLLDYFGAKKLHQITNGTALAATMYQATGTAPGSSGFVNITDLHGGKVAFGAENNDGTLTSTFVKSVEEIPYNISVIQISKILPSAAAEAPAPAPAQQNLTGIMSNHGCKVFADTLSSFGEALSTFNDNLDGGLTVFCPVDDAFKAFLPKFKNLTASGKLALLEFHGVPVYQSIATLKSNNGLQNTLATDGANKFDFTVQNDGEEVTLKTKLTTAKITNTIIDEQPLAIFAINKVLLPKELFKGEAPAPAPAPEPSAADAPAPAKKGKKKKKAADAPAADDDSDAPADSPGDAADDTADDSNGAVILNGGRYGNVIVALGFVLGLPLVL* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02489 420 FunFam Fasciclin-like arabinogalactan protein 2 25 167 - -
Lapu6g02489 420 SMART fasc_3 62 177 IPR000782 -
Lapu6g02489 420 SMART fasc_3 226 330 IPR000782 -
Lapu6g02489 420 MobiDBLite consensus disorder prediction 372 386 - -
Lapu6g02489 420 FunFam Fasciclin-like arabinogalactan protein 10 180 330 - -
Lapu6g02489 420 SUPERFAMILY FAS1 domain 32 174 IPR036378 -
Lapu6g02489 420 Gene3D FAS1 domain 24 175 IPR036378 -
Lapu6g02489 420 SUPERFAMILY FAS1 domain 183 330 IPR036378 -
Lapu6g02489 420 ProSiteProfiles FAS1/BIgH3 domain profile. 26 174 IPR000782 -
Lapu6g02489 420 ProSiteProfiles FAS1/BIgH3 domain profile. 187 327 IPR000782 -
Lapu6g02489 420 MobiDBLite consensus disorder prediction 336 391 - -
Lapu6g02489 420 Gene3D FAS1 domain 197 329 IPR036378 -
Lapu6g02489 420 Pfam Fasciclin domain 201 329 IPR000782 -
Lapu6g02489 420 Pfam Fasciclin domain 37 114 IPR000782 -
Lapu6g02489 420 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 393 IPR033254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02489 Lapu-Chr6 24794296 24795860 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02489 - - gmx:100810878 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02489 6 24794296 24795860 Lapu6g02489 6 24794296 24795860 ECH