Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02485 ATGTCTCTTGGGTATGCCGAGAAGCTTTCCTACATAGAAGATGTGGGCAACGTGGGAATGGTCGAATACTTCGACCCATCTCACGTTTTGCGAGAGAAAATAGATCAACTTGCTATTATGATAAAAAAGAGTAAGCATCTAGTGGTGTTTACAGGTGCAGGAATATCAACTTCATGTGGTATACCTGATTTTCGAGGTCCCAAGGGAATATGGACGCTTCAGCGTGAAGGTAAAGCCTTGCCTGAAGCATCACTGCCATTTCATCGTGCAGCACCAAGTTTGACACACATGGCTTTGGTTGAATTAGAAAAGGCTGGCATTTTGAAGTTTGTCATCAGTCAGAATGTTGATGGTCTCCATCTTCGATCTGGAATACCAAGGGAGAAACTAGCTGAATTGCATGGGAACTCCTTCATGGAGACATGCCCTTCTTGTGGAGAAGAGTACTTTCGTGATTTTGAGGTAGAAACTATTGGTTTAAAGGAGACATCAAGGCGTTGTACAGTTGCCAAATGCGGGACAAGACTTAAGGATACTGTCCTGGACTGGGAGGATGCATTGCCTCCAAAGGAGATGAATCCTGCTGAGAAGCACTGTAAACAGGCTGATATAGTGTTATGCTTGGGTACAAGTTTACAAATAACTCCAGCGTGCAACTTGCCTCTGAAAGCACTCCGTGGTGGGGGTAAAGTTGTTATTGTAAATCTCCAGAAAACTCCAAAGGACAAAAAAGCCAGCTTAGTCATACATGGGTTTGCAGATAAGGTAATTGCGGGTGTCATGGACCAGCTTAATATGCAGATTCCTCCATTCGTCAGGATTGATCTGTTCCAGATTGTTCTAGTGCAAGCTTTGAGCAATGATAAAAGATACGTGAACTGGACTCTCCAGATTGCCAGTGCTCATGGACCAAGGGCGGCATTGCCTTTCATCGAGTCCGTTGAGGTCTCCTTCTTGGACAGGGAAGATTACAAAGCAGCCATTCTAGATAAGCAACCATTTCGGCTTAAAAGGAGAACAGCATATAACAAAGCATTTGAAATGGTTCTGAAACTCAACTTCAGTGATGGCTGTGGTTGCTCATCTCTTGAAATTGATGTCCCGGTTGATTTTAAGGTTTCAACTGACTGCTTTGACTTTGACAAGGACTACATATTCCAAAAGCTGAGAGACAAGGCAGTTCTGGAATCAAGATGTGGTCAGAATGGTGTTATTGAGAGAAAGACCATCTTGACACCTAGAAGTGATGTAACTACCTATGCCATTGTGACCAATGTTGTTCAGTACAACAAAACATGTAAAGCAGCCATTGATTCTCTAAGTAATGGTGATCTTAAAAAAAGAAAAGCGAGTGTGACTGGTTCAGGATCATCTAGGAAGCGTTCAAAAGGGTCCTCAAAGTGTAAATCCAGATCAGAGAATATTAGGGATCATATGTAG 1440 0.4278 MSLGYAEKLSYIEDVGNVGMVEYFDPSHVLREKIDQLAIMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRAAPSLTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMETCPSCGEEYFRDFEVETIGLKETSRRCTVAKCGTRLKDTVLDWEDALPPKEMNPAEKHCKQADIVLCLGTSLQITPACNLPLKALRGGGKVVIVNLQKTPKDKKASLVIHGFADKVIAGVMDQLNMQIPPFVRIDLFQIVLVQALSNDKRYVNWTLQIASAHGPRAALPFIESVEVSFLDREDYKAAILDKQPFRLKRRTAYNKAFEMVLKLNFSDGCGCSSLEIDVPVDFKVSTDCFDFDKDYIFQKLRDKAVLESRCGQNGVIERKTILTPRSDVTTYAIVTNVVQYNKTCKAAIDSLSNGDLKKRKASVTGSGSSRKRSKGSSKCKSRSENIRDHM* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02485 479 Gene3D - 135 184 - -
Lapu6g02485 479 SUPERFAMILY DHS-like NAD/FAD-binding domain 5 292 IPR029035 -
Lapu6g02485 479 ProSiteProfiles Sirtuin catalytic domain profile. 27 267 IPR026590 -
Lapu6g02485 479 MobiDBLite consensus disorder prediction 447 461 - -
Lapu6g02485 479 Pfam Sir2 family 86 216 IPR003000 GO:0070403
Lapu6g02485 479 Pfam Sir2 family 52 75 IPR003000 GO:0070403
Lapu6g02485 479 MobiDBLite consensus disorder prediction 447 479 - -
Lapu6g02485 479 FunFam NAD-dependent protein deacetylase sirtuin-6 isoform X2 36 134 - -
Lapu6g02485 479 Gene3D - 36 262 - -
Lapu6g02485 479 PANTHER NAD-DEPENDENT HISTONE DEACETYLASE HST4 33 265 - -
Lapu6g02485 479 FunFam NAD-dependent protein deacetylase SRT1 135 184 - -
Lapu6g02485 479 CDD SIRT7 45 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02485 Lapu-Chr6 24749456 24760688 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02485 K11416 - gmx:100803586 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02485 6 24749456 24760688 Lapu6g02485 6 24749456 24760688 ECH