Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02479 ATGGTAGCGAAAATCCGGCAAAGTGCTACTGAGTCTCCTAATCCAAAACCTGAGGTTGGAGAGATTGACACCAGCCCACCTTTTCAGTCTGTTAAAGATGCTGTCTCTCTATTTGGTGAAGGTGCTTTCTCTGGGGAAAAACCAATGATTAAGAAGGCAAAACCATATTCTGCTGAGAGAGTATTGGCCAAGGAGACACAACTTCATGTAGCCAAAAAAGAGCTGAACAAGTTAAGGGAACAAGTGAAAAATGCTGAAACTACCAAGGCTCAAGCTCTTGTGGAGCTTGAAAGGGCTAAAAGGACACTTGAGGATCTGACACAGAAGATAAAAGTTATTAGTGATTCTAGGGAGTTAGCAATCAAGACTACCGAAGCTGCAAAAAGTCAGGCAAAACAACTTACAGAAGAAAAGTATGGTATCCCTGACGTAACAGATGGTGCTTGGAAGGAAGAATTAGATTCTGCCGTAAAAAGGTATGCATCTGTCATGACAGAACTTGATGCAGCAAAGCAAGTATTGAGTAAGACTCGACAAGAGTATGATTCATCCTTGAATGCAAGAAATTCTGCTTTGAAGCAAGCAACAGAAGCTGGAGATGCATTGAAGGAAAACACAGAAAGAGTGTCGGAGCTTTCTAAAGAAATTTCATCTGTAAAGGAGTCAATTGAGCAAGCAAAGCTTGCATCTATCGTAGCACATCAACAGCAAGCAATGATTTTGGCTGAGAAAGATGTTCTAAGACAGTCATATAAAGCTACCCTGGAACAATCTGAAAAAAAATTGCTTGCTTTAAAGAAGGAATTCAGTCCTGAGCTTTCCACGAAACTTGAAATGGAGCTGGGGGAGAGAATGAGTGAAATTGGGGCTCTGCAAAAGGAAATGGAAAACAAAAGGACATCGGACTTGGACTCTGTGAAAAGCGTCACTTTGGAGCTTGATGATGCCAAGGAGTCACTGCAGAAAGTAGCAGATGAGGAAAGCTCTCTTAAAAGCCTAGTGGAATCTCTTAAGGTGGAATTGGAGAATGTAAAAAAAGAACATTCTGAGTTGAAAGAGAAGGAATCTGAAACTGAATCCATTGTTGGGAATCTGCATGTCAAGCTCCGGAAAAGCAAGTCTGAGCTTGAAGCCTGCATGTCAGAAGAATCTAAAGTTAGAGGTGTATCGGAGGAAATGATCTTGACGCTTAGCCAGCTGACATCTGAAACAGAAAATGCAAGGCGGGAAGCAGAAGATATGAAGAAAAAAACATCCGAATTGAAGAAGGAAGCTGAAGTTACCGTACTAGCATTAGCAGACGCAGAGAAAAAGCTTAAAGTGGCACTGGAAGAAGCAGAAGCAGCAAAAGCAGCTGAGAAAAGTGCTCTTGACCAGATTACGGTGTTAACTGAAAGAACTACTGCTGCACGTGCATCAACATCTGAATCTGATGCTGTGATTACAATCTCAAAAGAGGAGTTTGACTCCCTAAGCCATAAAGTTGAGGAGTCTGACAAATTAGCAGACATGAAAGTGGCTGCTGCCAAGGCACAGGTCGAAGCTGTGAAGGCTAGCGAAAATGAGGCTTTCAAGAGGCTAGAGACAACTCAGAAGGAGATTGAGGATATAAAGGCTGCAACACAAGAGGCTCTGAAAAAGGCTGAAATGGCTGAAGCAGCGAAAAGGGCAGTGGAGAGTGAGCTCCGAAGATGGCGCGAGAGGGAGCAGAAGAAGGCTGCAGAAGCTGCATCTAGAATTCTGGCTGAAACACAGGTGTCAACAGAATCATCTCCTCAGCACTATAGGATTCAAAAGCAGAATCCTCCTCATACAACAGTGGAGGTGAGGAAGTTTGAAAAGGAGAAGGTTCCAGTTTCAAAAAAAGCCCTCTTGCCTAATATTAGTGGCATCTTCCAAAGGAAGAAAAACCAGGTTGAGGGTGGTTCTCCTTCTTATCTGCCTGGTGAGAACCCTGTATGA 1962 0.4302 MVAKIRQSATESPNPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGEKPMIKKAKPYSAERVLAKETQLHVAKKELNKLREQVKNAETTKAQALVELERAKRTLEDLTQKIKVISDSRELAIKTTEAAKSQAKQLTEEKYGIPDVTDGAWKEELDSAVKRYASVMTELDAAKQVLSKTRQEYDSSLNARNSALKQATEAGDALKENTERVSELSKEISSVKESIEQAKLASIVAHQQQAMILAEKDVLRQSYKATLEQSEKKLLALKKEFSPELSTKLEMELGERMSEIGALQKEMENKRTSDLDSVKSVTLELDDAKESLQKVADEESSLKSLVESLKVELENVKKEHSELKEKESETESIVGNLHVKLRKSKSELEACMSEESKVRGVSEEMILTLSQLTSETENARREAEDMKKKTSELKKEAEVTVLALADAEKKLKVALEEAEAAKAAEKSALDQITVLTERTTAARASTSESDAVITISKEEFDSLSHKVEESDKLADMKVAAAKAQVEAVKASENEAFKRLETTQKEIEDIKAATQEALKKAEMAEAAKRAVESELRRWREREQKKAAEAASRILAETQVSTESSPQHYRIQKQNPPHTTVEVRKFEKEKVPVSKKALLPNISGIFQRKKNQVEGGSPSYLPGENPV* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02479 653 MobiDBLite consensus disorder prediction 583 606 - -
Lapu6g02479 653 MobiDBLite consensus disorder prediction 405 420 - -
Lapu6g02479 653 Coils Coil 397 428 - -
Lapu6g02479 653 Coils Coil 527 568 - -
Lapu6g02479 653 Coils Coil 202 229 - -
Lapu6g02479 653 Coils Coil 61 116 - -
Lapu6g02479 653 Coils Coil 248 268 - -
Lapu6g02479 653 Pfam Weak chloroplast movement under blue light 21 571 IPR008545 -
Lapu6g02479 653 MobiDBLite consensus disorder prediction 583 605 - -
Lapu6g02479 653 MobiDBLite consensus disorder prediction 398 420 - -
Lapu6g02479 653 MobiDBLite consensus disorder prediction 634 653 - -
Lapu6g02479 653 Coils Coil 432 452 - -
Lapu6g02479 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 20 626 - -
Lapu6g02479 653 Coils Coil 306 361 - -
Lapu6g02479 653 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02479 Lapu-Chr6 24688226 24693533 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02479 - - gmx:100794569 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02479 6 24688226 24693533 Lapu6g02479 6 24688226 24693533 ECH
Lapu6g02479 6 24688226 24693533 Lapu6g02479 6 24688226 24693533 PCT