Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02449 ATGATGGCTTCCCCAAACAACCACCACCCCAACCCCAACACCCACCCTCCTCCCCCCTTCGACATGCACACCTTCTTCAACCCTCCGCCCCCTTCATCAAACCCTAACCCTAACCCTAATCCTAACCCTTCCTCATCATACCCTCCGCCCTTCTCCGCCAACGCGCCCTTTCACTTCCCCGCCTTCGACCTCCCTCTCCACCACCACCGTTCCCTCTCCTTCCCCACCCAGCCCATCCCTCCGCCCTCCAACCCCAACGCCGGCGCCCGCCTCATGGCCCTCCTTAGCAACCCCTCCCCCCCGCCCCCCGACTTCGCGCCTCCCTCTTCCTCCTCCCCTTCTACCGCCCTCGCTGCCGCCACTGCCGCCGCCGCCGCTCTCACGCGCCTCCCCAGCGGCAAGGTCCCCAAGGGAAGGCACCTCGCCGGGGAGCGCGTTGCCTACGACGTCGACGTCCGGCTGCCTGGCGAGGTCCAGCCGCAGCTTGAGGTTGCTCCGATCACGAAATACGGGTCGGATCCTAACCCGGTTTTGGGGAGGCAGATTGCGGTGAATAAGTCGTATATATGCTATGGGCTGAAACAGGGGAACATTAGGGTGCTTAACATCCACACTGCTGTCAGGTCCCTCCTCAGAGGCCACACCCAGAGGGTCACAGACTTGGCGTTTTTTGCTGAAGATGTTCATCTCCTGGCTAGTGTTGGCACAGATGGCCGTGTCTACGTGTGGAAGATCTCTGAAGGTCCAGATGATGAAGATAAGCTTCAAATTACAGCCAATATTGTTATTGCTATTCAAATAGTGGGGGAGGAGAAAGTTGAACATCCTCAAATTTGCTGGCACTGTCACAAACAAGAGATTTTGATAGTTGGTATGGGAAAACATGTTTTGAGAATTGACACCACTAAAGTTGGAAATGGTGAAGCGTTTGTGGCAGAGGATCCTCCTCTGAGATGTCCTGTTGACAAGCTCATTGATGGGGTTCAGCTGGTAGGCACACATGATGGAGAGGTGACTGATTTATCAATGTGCCAATGGATGACCAATCGATTGGTATCTGCATCGCAGGATGGCACGATAAAGATCTGGGAAGATCGCAAGGCACAGCCACTTGAAGTTTTGAGACCACATGACGGACATCCAGTTTTTTCTGCTACATTTTTTACTGCTCCTCACCAGCCTGATCATATTGTCCTTATCACGGCAGGACCTCAAAATCGAGAGGTGAAACTATGGGTATCAGCTAGTGAAGAAGGTTGGCTGCTCCCAAGTGACACTGAATCGTGGAAATGCACTCAGACGTTGGAGTTGAAGAGTTCAGCTCAACCATCTAGAGATGCATTCTTTAATCAAGTTGCAGCATTGTCTCATGCAGGTCTGCTATTACTTGCAAATGCCCAGAGGAACGCTATATATGCTGTACATTTAGAATACGGTCCTAATCCAGAATCAACACGCATGGATTATATAGCTGAGTTTACTGTGACCATGCCCATTCTGAGTTTTACTGGGACAAGTGATATACTACCTCATGGTGAACATATTGTTCAGGTTTACTGTGTCCAGACACAAGCTATTCAGCAGTATGCTTTGGATTTAGCCCAGTGCTTGCCTCCACCATTGGATAATGTGGGAATAGAGAAGTCAGATTCCAGTGCTTCCCGTGATGCAATTACTGTTGAAGGATTCCACACTTTAGACCCTTCTGCTCCCAAAACAATGTTACAAGCAGGTAGTACTGAAAGTGGACTCGTGGCTAGATATCCTTTAAGCTCTGGCCAGGTTGAGGCACCTATTACAAGTTCAAACACTGAAGCTAAGCCTGTTACATTAGCTCCTTCTAGTAGTGATCCTGATATCGTTTGTATTCCATCTCCACCTCTTCCTTTAAGCCCAAGGTTATCTAGGAAACTCTCTGATATCAGGAGTCCACAGTCAAATTTGAGTGATCATGTTGGGGAACATCCTGTTAATGATTATTCCATAGACAGACAAATGGATACCATTCACAGAAACCTCTCTGAGCCATTGAGTAGTGATTCAAAGAATGATGAGAAGAAAGTGAAGCAGGATCACATTTCTAGTGTACTTAATCCTTCTGTCATGTTTAAGCAACCAACCCATCTAATCACACCATCTGAGATCACAAAGGCTGGTTCCTCCTCTGAGAATAATACAATTGATAGGAAGAGTGAGGGAGAAACAAAGATCCAGGATGTGGGTAATGCTGAAGTGGAAGTGAAGGTTGTGGGTGAGATGAGATCTAATCAAATTGATGAATTCGGCCGGCAAGGGTCACAACAAAATCCAGTTTCTGATAGTAAAGAAAAAATATTTTGCTCTCAGGCTTCGGATCTTGGTATTGAGATGGCTCGAGAAGGCTGTGTGATAGCTGGGGACACATACCTTACAGAGGAACCTGGACAACTTCATTCAACTGGAGCGGTCTCACTAGCTCAACCTCCTGATGCTGGCGAGGATGGACTCCAAGATATGGCAAAAGATGCCCATGAAAAGGTTTCTGACTCATCTGCTTCTGTGGCAGTGCCACCATCTCCGTTGCCTGGTGCAAAAGGGAAAAGACAGAAGGGTAAAAATTCTCAAGCATCTGGCCTGTCTTCCTCATCTCCAAGTGTGTGCAATTCAACTGATTCATCCAATGAACCGAATGGAAATTCTAGCCTTCCTTCTGCTGAAAATGCTTACCCTCAAATTCTGGCAATGCAAGAATCACTCAATCAGTTAATGACAATGCAAAAAGAGATGCAAAAGCAAATGACAATGATGGTTGCTGTTCCAGTGACAAAAGAAGGTAGAAGGCTTGAGGCTGCCCTAGGGAGAAACATGGAAAAAGCTGTCAAGGCCAACAGTGATGCTTTATGGGCTCGAATCCAGGAGGAAAATGCAAAAAATGAAAAGTTGTTACGAGACCGTATCCAGCAAATTACAGGTTTGATTAGTAACTTTATGAATAAAGATCTACCAGCAATTCTGGAGAAAACAGTAAAGAAGGAAATGGCCTCGGTTGGGCAAGCTGTAGTACGTGCAATGTCGCCTGCTGTGGAGAAAATAATATCTTCTGCTATTGTCGAATCCTTCCAGAGAGGAGTGGGTGATAAGGCAGTGAACCAACTTGATAAATCAGTTAGTTCAAAACTGGAAGCAACTGTAGCTAGGCAAATCCAAGCACAATTTCAGACGACTGGCAAACAGGTGCTTCAGGAGGCACTCAAATCCAGTTTTGAAACATCAGCTGTTCCTGCATTTGAAATGTCGTGTAAAGCCATGTTTGAGCAAGTGGATGCCACATTTCAGAAAGGCATGGCTGAACATTCAGCTGCTGTGCAGCAACGCCTTGAATCTGCTCCCACTTCTTTGGCAATGACGCTAAGGGATTCCATTAATTCAGCATCATCAATTTCTCAAACTTTGAGTAGAGAAGTGCTTGAGGGCCAGAGAAAGCTAGTAGCACTTGCAGCTACAAGAACAAACTCAGGCACATTAAATCCTTTGCCCGTCCAGCTGAATAATGGTCCTTTACTTCATGAAAAGGTTGAGGTTCCCTTGGATCCCACGCAGGAGCTAGCAAGGTTGATTTCTGAACGGAAATACGAAGAGGCTTTTATTGGAGCTCTACATAGAAGTGATGTATCCATTGTATCATGGTTATGTTCTCAGGTCGATTTACATGGGCTCTTGTCTATGGCTCCTCTTCCTTTAAGCCAAGGTGTACTGCTCTCACTTCTGCAGCAACTGGCTTGTGACATTAACAGCGATACACCACGAAAGATCGCATGGTTAACAGATGTGGCATCTGCCATAAACCCATCGGACCCAGTGATTGCGATGCACACACGGCCCATCTTTGAGCAAGTCTACCAGATACTGAATCATCAACGTAGCTTGCCTACAATGACTGGAACTGATCTCTCAAGTATCCGTCTTTTATTGCATGTCGTCAACTCCATGCTCATGACATGTAAATGA 3987 0.47 MMASPNNHHPNPNTHPPPPFDMHTFFNPPPPSSNPNPNPNPNPSSSYPPPFSANAPFHFPAFDLPLHHHRSLSFPTQPIPPPSNPNAGARLMALLSNPSPPPPDFAPPSSSSPSTALAAATAAAAALTRLPSGKVPKGRHLAGERVAYDVDVRLPGEVQPQLEVAPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGRVYVWKISEGPDDEDKLQITANIVIAIQIVGEEKVEHPQICWHCHKQEILIVGMGKHVLRIDTTKVGNGEAFVAEDPPLRCPVDKLIDGVQLVGTHDGEVTDLSMCQWMTNRLVSASQDGTIKIWEDRKAQPLEVLRPHDGHPVFSATFFTAPHQPDHIVLITAGPQNREVKLWVSASEEGWLLPSDTESWKCTQTLELKSSAQPSRDAFFNQVAALSHAGLLLLANAQRNAIYAVHLEYGPNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQCLPPPLDNVGIEKSDSSASRDAITVEGFHTLDPSAPKTMLQAGSTESGLVARYPLSSGQVEAPITSSNTEAKPVTLAPSSSDPDIVCIPSPPLPLSPRLSRKLSDIRSPQSNLSDHVGEHPVNDYSIDRQMDTIHRNLSEPLSSDSKNDEKKVKQDHISSVLNPSVMFKQPTHLITPSEITKAGSSSENNTIDRKSEGETKIQDVGNAEVEVKVVGEMRSNQIDEFGRQGSQQNPVSDSKEKIFCSQASDLGIEMAREGCVIAGDTYLTEEPGQLHSTGAVSLAQPPDAGEDGLQDMAKDAHEKVSDSSASVAVPPSPLPGAKGKRQKGKNSQASGLSSSSPSVCNSTDSSNEPNGNSSLPSAENAYPQILAMQESLNQLMTMQKEMQKQMTMMVAVPVTKEGRRLEAALGRNMEKAVKANSDALWARIQEENAKNEKLLRDRIQQITGLISNFMNKDLPAILEKTVKKEMASVGQAVVRAMSPAVEKIISSAIVESFQRGVGDKAVNQLDKSVSSKLEATVARQIQAQFQTTGKQVLQEALKSSFETSAVPAFEMSCKAMFEQVDATFQKGMAEHSAAVQQRLESAPTSLAMTLRDSINSASSISQTLSREVLEGQRKLVALAATRTNSGTLNPLPVQLNNGPLLHEKVEVPLDPTQELARLISERKYEEAFIGALHRSDVSIVSWLCSQVDLHGLLSMAPLPLSQGVLLSLLQQLACDINSDTPRKIAWLTDVASAINPSDPVIAMHTRPIFEQVYQILNHQRSLPTMTGTDLSSIRLLLHVVNSMLMTCK* 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02449 1328 MobiDBLite consensus disorder prediction 813 898 - -
Lapu6g02449 1328 MobiDBLite consensus disorder prediction 72 117 - -
Lapu6g02449 1328 MobiDBLite consensus disorder prediction 1 52 - -
Lapu6g02449 1328 SMART WD40_4 204 244 IPR001680 GO:0005515
Lapu6g02449 1328 SMART WD40_4 327 364 IPR001680 GO:0005515
Lapu6g02449 1328 ProSiteProfiles Trp-Asp (WD) repeats profile. 331 373 IPR001680 GO:0005515
Lapu6g02449 1328 MobiDBLite consensus disorder prediction 863 898 - -
Lapu6g02449 1328 SUPERFAMILY WD40 repeat-like 180 440 IPR036322 GO:0005515
Lapu6g02449 1328 Gene3D - 1240 1327 IPR044938 -
Lapu6g02449 1328 ProSiteProfiles Trp-Asp (WD) repeats profile. 211 253 IPR001680 GO:0005515
Lapu6g02449 1328 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 164 476 IPR032401 -
Lapu6g02449 1328 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 211 248 - -
Lapu6g02449 1328 Gene3D - 167 518 IPR015943 GO:0005515
Lapu6g02449 1328 MobiDBLite consensus disorder prediction 599 658 - -
Lapu6g02449 1328 MobiDBLite consensus disorder prediction 638 652 - -
Lapu6g02449 1328 FunFam enhancer of mRNA-decapping protein 4 163 477 - -
Lapu6g02449 1328 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 2 1326 IPR045152 GO:0031087
Lapu6g02449 1328 MobiDBLite consensus disorder prediction 716 735 - -
Lapu6g02449 1328 FunFam Enhancer of mRNA-decapping protein 4 1240 1326 - -
Lapu6g02449 1328 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 331 364 - -
Lapu6g02449 1328 MobiDBLite consensus disorder prediction 10 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02449 Lapu-Chr6 24397507 24408290 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02449 K12616 - gmx:100798228 2139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02449 6 24397507 24408290 Lapu6g02449 6 24397507 24408290 ECH