Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02444 ATGGATGGGAAAAGCTCTCTACAAATAACTAGAAGTGGTACGGGTGATTATGATGACGATGGACATGCCAAAAGGACTGGGAATTTGAAGACTGCTGTAGCTCATATCATTACTGCCGTTATTGGTTCTGGTGTTCTTTCTCTAGCATGGAGCACTTCCCAATTAGGATGGATTGGAGGGCCAGTTGCCCTGCTTTGTTGTGCAATTGTCACCTATATTTCTGCATTCCTCCTGTCAGATTGCTACAGAACACCTGATCCTGTAACTGGGAAAAGAAACTACTCTTACATGGATGCTGTTAGAATTTATCTTGGTATTAAAAGAACATGGATAGCTGGCTTCCTTCAATTCTTGATTTTATATGGGACTGGTATTGCATATGTACTAACCACAGCAACATGTCTAGGGGCAATTCTGGAAGCAAATTGCTATCACAAAAAAGGGCGTCAAGCTCCTTGTCATTATGAGGGAAACATGTATATGGTGATGTTTGGAGTAGTTCAAATTGTAATGTCATTCATACCGGATCTCCATAACATGGAATGGGTTTCAGTTATTGCGGCAATTATGTCCTTTACATACTCATTCATTGGACTAGGACTTGGCATAGCAACAGTCATAAAAAATGGAAGAATTATGGGGAGTTTGACAGGAATACCAACTAATACAATTGCTGACAAATTTTGGTCAGTCTTCCAAGCACTTGGTGACATTGCCTTTTCCTATCCATACTCCATTCTCCTTCTTGAAATCCAGGACACTCTAGAGTCTCCTCCACCAGAAAATCAGACCATGAAAAGGGCCTCAATGGTTGCAATCTTCATTACAACATTCTTCTACCTGTGCTGTGGATGCTTTGGATATGCAGCTTTTGGAAATAACACACCAGGAAACCTCATGACAGGCCTTTTGAAAGGGTCTGGGTTTTATGAGCCTTTCTGGCTTGTTGACATTGCTAATGTTTGCATCATTATTCATTTGGTGGGAGGATATCAGGTTTACAGTCAACCTGTATACAGTACTGCTGATAGATGGGTTTCAAGAAAATACCCCAACAGTGGCTTTGTGAACAATTTCTACAAAGTGAAACTGCCTTTACTTCCTAGTTTTCAGCTAAACCTTTTCAGGTTCTGTTTTAGAACAACCTATGTGATTTCAACAGTTGGTTTAGCAATCTTTTTTCCTTACTTCAACCAAATTCTAGGAGTGTTAGGAGCCATAAACTTCTGGCCATTGGCTATATACTTCCCTGTAGAGATGTACTTTGTACAGCACAAAGTTGCAGCTTGGAGTAGAAAATGGATTGTTCTCACAACGTTCAGCTTTGCATGTTTTCTTGTCAGTGCAATGGGCTTTGTTGGGTCAATCGTTGGGATTGTAAAAGAAAAATTAAACTAA 1398 0.4006 MDGKSSLQITRSGTGDYDDDGHAKRTGNLKTAVAHIITAVIGSGVLSLAWSTSQLGWIGGPVALLCCAIVTYISAFLLSDCYRTPDPVTGKRNYSYMDAVRIYLGIKRTWIAGFLQFLILYGTGIAYVLTTATCLGAILEANCYHKKGRQAPCHYEGNMYMVMFGVVQIVMSFIPDLHNMEWVSVIAAIMSFTYSFIGLGLGIATVIKNGRIMGSLTGIPTNTIADKFWSVFQALGDIAFSYPYSILLLEIQDTLESPPPENQTMKRASMVAIFITTFFYLCCGCFGYAAFGNNTPGNLMTGLLKGSGFYEPFWLVDIANVCIIIHLVGGYQVYSQPVYSTADRWVSRKYPNSGFVNNFYKVKLPLLPSFQLNLFRFCFRTTYVISTVGLAIFFPYFNQILGVLGAINFWPLAIYFPVEMYFVQHKVAAWSRKWIVLTTFSFACFLVSAMGFVGSIVGIVKEKLN* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02444 465 PANTHER OS05G0424000 PROTEIN-RELATED 29 457 - -
Lapu6g02444 465 MobiDBLite consensus disorder prediction 1 20 - -
Lapu6g02444 465 Pfam Transmembrane amino acid transporter protein 26 460 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02444 Lapu-Chr6 24350118 24355023 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02444 17 462 Organic Solute Cotransporters AT5G09220 51.002 5.74e-175 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02444 K24917 - gmx:100818535 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02444 6 24350118 24355023 Lapu6g02444 6 24350118 24355023 ECH
Lapu6g02444 6 24350118 24355023 Lapu6g02444 6 24350118 24355023 PCT