Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02441 ATGAAAGATCAAGAAGGTTCAGCAACTGACAGCGCCCCATTGTTGGAGACTCAGTATGCAGATTGTCATCATGTTGAAAGAACTGGAACAGTGTGGACTGCAGTGGCGCACATAGTGACAGGAGTGATAGGATCAGGGGTGTTGTCTTTGGCATGGAGCATTGCACAGCTTGGATGGGTTGGAGGGCCTCTCACAATCATTTTCTTTGCTTGCATAACTCTCCTCTCTTCTTTCCTTCTCAGTAACACCTACCGTTCTCCAGACCCTGAACATGGCCCCCAAAGGAGCTCCTCATACCTTGATGCTGTTAATCTCCATAAGGGAGAAGGGAATAGTCGTTTTTGTGGTGTTTTTGTGAACGTAAGCTTGTATGGTTTTGGAATTGCTTATGTCATTACTGCTGCTATCAGCATGAGAGCAATCCAAATATCAAACTGTTACCATGACAAAGAGGATGAAAAAACATGTGGATTTGCGGGTCCATATTTCATGATTATTTTTGGGGCTATCCAAGTTGTTCTCTCACAGACACCCAACTTCCACAATATTCAGTGGTTGTCAATTGTAGCGGCAATTACGTCCTTTTTCTATGCTTTCATAGGAATGTGGCTTTCTGCTGGACAAGTCTTGGAAAATGGACATGCTGAGGGTACCATTCATGGAATCCCTACTTCTAGTGGAATTGATAAATTATGGCTGGTTGCTCAAGCACTTGGTGACATAGCATTCTCCTATCCATTCTCAGTAATTCTTATAGAAATACAGGATACTTTGAAGTCACCTCCACCAGAAAACCAAACCATGAAGAAGGCCTCAACAATATCTGTCATCATCACAACTTTTTTCTACCTATGTTGTGGGTGTTTAGGATATGCCGCCTTTGGTAATGATACACCAGGAAACCTTTTAACAGGGTTTACATCTAATGCAGAGCATTGGCTTGTAGACTTTGCCAATGCTTGTATAGTGATTCACCTAGTTGGTGCATATCAGGTGTATAGCCAGCCACTTTTTGCCAATGTTGAGAATTGGCTTCGTTTCAAGTTCCCAGACAGTGAATTTGTGAATCACGTGTACTTCTTGAAACTCCCTTTGCTGCCAGCTTTCCAACTAAGTTTTCTCAGGCTTTCTTTCAGAACTGCATATGTTGCATCAACAACTGTGATTGCAATTCTCTTTCCCTACTTCAATCAGATTTTGGGAGTTTTGGCTGGAATAATCTATTATCCATTATCCATATATTTTCCAGTGGAAATGTATTTGAGCCAGAGCAATATTGAGCCATGGTCGTCTAAGTGGGTCATGCTTAGGGCTTTTAGCGTTGTTGGTTTTGCGGTGGGACTGTTCACTCTCGTTGGATCCATTGAAGGGATAGTATCTGCAAAACTAAGCTGA 1395 0.4222 MKDQEGSATDSAPLLETQYADCHHVERTGTVWTAVAHIVTGVIGSGVLSLAWSIAQLGWVGGPLTIIFFACITLLSSFLLSNTYRSPDPEHGPQRSSSYLDAVNLHKGEGNSRFCGVFVNVSLYGFGIAYVITAAISMRAIQISNCYHDKEDEKTCGFAGPYFMIIFGAIQVVLSQTPNFHNIQWLSIVAAITSFFYAFIGMWLSAGQVLENGHAEGTIHGIPTSSGIDKLWLVAQALGDIAFSYPFSVILIEIQDTLKSPPPENQTMKKASTISVIITTFFYLCCGCLGYAAFGNDTPGNLLTGFTSNAEHWLVDFANACIVIHLVGAYQVYSQPLFANVENWLRFKFPDSEFVNHVYFLKLPLLPAFQLSFLRLSFRTAYVASTTVIAILFPYFNQILGVLAGIIYYPLSIYFPVEMYLSQSNIEPWSSKWVMLRAFSVVGFAVGLFTLVGSIEGIVSAKLS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02441 464 Pfam Transmembrane amino acid transporter protein 27 458 IPR013057 -
Lapu6g02441 464 PANTHER OS05G0424000 PROTEIN-RELATED 30 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02441 Lapu-Chr6 24312711 24318541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02441 19 459 Organic Solute Cotransporters AT5G09220 47.297 1.71e-151 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02441 K24917 - gmx:100801302 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02441 6 24312711 24318541 Lapu6g02441 6 24312711 24318541 ECH
Lapu6g02441 6 24312711 24318541 Lapu6g02441 6 24312711 24318541 PCT