Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02424 ATGCAGGCACATCCGAATTCGTACGCGCTGGTTCTGAGCACGGAAAATGAGATCTCGAGCATGTACTGGGGCAACAACCCATCAATGCTTCTGGTGAACTGTCTCTTCCGCATGGGCGGCTCCGCCGCGCTCCTATCAAGCCACCCGTCGGACCGCCGGCGCGCAAAGTACCAGCTGCTCCACACGCTCCGGACGCGCGTAGGCGCCGACGACAACGACTACAACTGCGTGTTCCGAGCGGAGGATGAGGAGAACAAGGTGGGAGTGTCGCTCTCGAAAGAGGCGATGAACGTGGCACGCGACGCCCGAAAGTCCACATCACCTCCCTAG 330 0.6061 MQAHPNSYALVLSTENEISSMYWGNNPSMLLVNCLFRMGGSAALLSSHPSDRRRAKYQLLHTLRTRVGADDNDYNCVFRAEDEENKVGVSLSKEAMNVARDARKSTSPP* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02424 109 Gene3D - 1 106 IPR016039 GO:0016746
Lapu6g02424 109 SUPERFAMILY Thiolase-like 2 55 IPR016039 GO:0016746
Lapu6g02424 109 Pfam FAE1/Type III polyketide synthase-like protein 1 104 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lapu6g02424 109 PANTHER 3-KETOACYL-COA SYNTHASE 1 104 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02424 Lapu-Chr6 24058520 24059818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02424 1 105 Miscellaneous Gene Families AT4G34510 54.286 3.20e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02424 K15397 - gmx:100803579 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02424 6 24058520 24059818 Lapu6g02424 6 24058520 24059818 ECH