Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02374 ATGAACAACTTAGAGTCCTACCCTCCCGTTCTCCGCCACCTTGACCAGCAGCAACATCCACCACCACCACCTAACCTCAACCCGGATGAAGAGTTTCAGGACCCGGATCCTGTGCCCATCATAGATCTCGAGTGCTTACAACATGACAAGTTGGAAGAAGCTTGCAAGAACTGGGGTTTGTTCCGTTTGGTCAACCATGGTGTTCCGTTGACCCTTTTGAAGGAGCTTCAAGAGGTAGCGAAGGAACTGTTCTCTCTGACCTTTGAGGCCAAAGAAGTTGCATGCAGTGGCAGCCCTGTGACATACTTTTGGGGCACCCCTGCCCTAACGCCATCGGGAACAGCCCTAACGAGAGGCCCCCAAAACATGAATTGGGTTGAAGGGTTTGATGTGCCGTTGAGTCAACTCTCCCACTTCAACCCTCAACTTCCCACGCTCGAGTCCGTAAGAGTTCTGCTAATGGAGTATGAAAGGCATTTGTCGAGAATTGGCAGAAGTTTATTTGAAGCTATGGCAAAGAACCTTGAGCTGAATATAAAAAGGTCAAAGGAATACTTAGCAGAAAAAAGTGGAATGGTGCGTGTGTATCGATACCCTAATTGCCCTGATACAAATGCTGGTTGGGGCATGGAGGCGCACACAGATAGCTCAGTGCTGTCCATATTGAACCAAGGTGATGAAGTTGGTGGACTTCAGCTGCTCAAACATCATCAATGGCTCCATGTAAAACCCATTCCCAACACTTTGATTGTCAACCTCGGAGACATGATGCAGGCCATTAGCAACGACAGATACAAGAGTGTGACACACAGAGTGAGCATGAACAAACACAAAGAGAGGATTTCACTGTGTTACTTTGTGTTCCCTGGTGAAGACGTTGTGATTGAAAGCTCCAAGTACAAGCCCTTCACTTACACCCAGTTCAGAGCACAGGTGCAAGAAGATATCAAAGCCTTAGGCCACAAAGTTGGCCTTCCAAGATTTCACCACAACCATTACTCCCAAGCTTCATTGCTTTGA 1020 0.4765 MNNLESYPPVLRHLDQQQHPPPPPNLNPDEEFQDPDPVPIIDLECLQHDKLEEACKNWGLFRLVNHGVPLTLLKELQEVAKELFSLTFEAKEVACSGSPVTYFWGTPALTPSGTALTRGPQNMNWVEGFDVPLSQLSHFNPQLPTLESVRVLLMEYERHLSRIGRSLFEAMAKNLELNIKRSKEYLAEKSGMVRVYRYPNCPDTNAGWGMEAHTDSSVLSILNQGDEVGGLQLLKHHQWLHVKPIPNTLIVNLGDMMQAISNDRYKSVTHRVSMNKHKERISLCYFVFPGEDVVIESSKYKPFTYTQFRAQVQEDIKALGHKVGLPRFHHNHYSQASLL* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02374 339 MobiDBLite consensus disorder prediction 13 34 - -
Lapu6g02374 339 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 189 289 IPR005123 -
Lapu6g02374 339 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 38 310 - -
Lapu6g02374 339 MobiDBLite consensus disorder prediction 15 30 - -
Lapu6g02374 339 Pfam non-haem dioxygenase in morphine synthesis N-terminal 38 131 IPR026992 -
Lapu6g02374 339 SUPERFAMILY Clavaminate synthase-like 18 313 - -
Lapu6g02374 339 FunFam 1-aminocyclopropane-1-carboxylic acid oxidase-like protein 3 310 - -
Lapu6g02374 339 PRINTS Isopenicillin N synthase signature 249 275 - -
Lapu6g02374 339 PRINTS Isopenicillin N synthase signature 51 68 - -
Lapu6g02374 339 Gene3D - 36 324 IPR027443 -
Lapu6g02374 339 Pfam 2OG-Fe(II) oxygenase superfamily 194 289 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02374 Lapu-Chr6 23425008 23430716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02374 23 286 Glycosyltransferase AT5G59530 31.818 1.22e-38 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02374 K04125 - gmx:100794065 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02374 6 23425008 23430716 Lapu6g02374 6 23425008 23430716 ECH