Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02240 ATGATGGCAGAACACCAAAGAATTCATCCTGTTCATGATGTGGAGGCACCACACAGACCTTTGGTGCCTGGAAACAGTACTAAATCTGATAGGGGTTTTCCTAAACGCACCTTTCCTGCGATGCATTCCAAGCCACCAAAGAGAAGAAGAAGCTGTTGCTGCAGGTTTTTGTGTTGGACACTTAGCATATTGCTGATTTTGATCGTTGCTATTGGCATCACTGTAGGGATCATATACCTTGCGTTTAGGCCAAAACTCCCCAATTACTCAGTGGACCAACTGAGGATAAGCCAGTTCAATGTTTCTGACGACAACACCCTCTCAGCTACCTTTAATGTGGCAATCACTGCAACAAATCCAAACAAGAAGATTGGGATATACTATGAGGGTGGAAGCCACATAAGTGCTTTGTACGAGGACACACAATTGTGTGAAGGGTCTTTGCCAAAGTTCTACCAGGGTCACAGGAACACCACAGTGCTTGATCTGTCTCTAACAGGTCAAGCACAGGATGCAACTAGCCTGATGAGTAGAATTCAGGAGCAGCTGCAACAGACCAACAATATTCCCCTTGATCTTAAGGTTAATCAACCTGTGAGGGTTAAGCTTGGTAAGTTGAAGCTCTTCAAAGTCAAGTTCAGGGTTAGGTGTAAGCTTGTGGTGAATAATCTTGGTGCTAGTGATGATATTAGCATTTCAAGCAGTAGTTTTGAGTCTCAGGTGTTCGACGAAATGTCAAACCGAGTTTGCATAAAAAAAGGGTTGTTGACACTAATGGGTGTGAAGTTTGTGGGCAGACTGGAACACCCGACTCGTTTTTCTATGTGTGTTCGATCCAAAACAACTTCTGCTCAGTATGTAGCGTCGAGATTTCGAGACCCCACGTTTGAGAAACTCATGGACAACTACAAGAACCTTGTCAAGGTCATTTCCATTCAAGACCTCATCCTTGCAAACCCAAAAAACCCATCGGTCTCCATTGATTTCCTCTCCAAGCTCTCCCAGAAGCTCCACCTAAACCGCGGGGCCATTGCCTTCCTCCGCAAGTTTCCTCACATCTTCCACATTTACTATGATCATTCCAAGTTGAAGCCCTTTTGCAGGTTAACTGACGCTGCTCTTGGTGTCACACGGCAGGAAGCGGTGGCCATCAATGCTTCTTTGCCTGTTGTTGTTGAAAGACTTGTTCGGATATTGTCCATGTCTGCATCCAGAATGGTGCCTCTTAGAGCTGTTTTTAAGGTTTGGAAGGAGCTTGGGCTGCCTGATGATTTCGAGGACTCGGTTTTATCTGCTAATTCTGGTGTCTTTCAGCTGTGTGATGCACATGAACAGAATACTCATTTGTTGAAGCTGGTTGATGGTATTTCCAGCAATGACTTTAGGGCGGCTGTTGAGGATTGGAGGGTTGTTGAGTGCTGCAAGGAGGACTGCAGTGTTGATAGGATGGAAATGCAGTTCAGTTTCAAGCATGGGTATCCTCCGGGGATGAGATTGAGCCAGAATTTCAAGGCCCAGGTGAAGGAGTGGCAGAGGTTGCCATATGTGGGGCCTTATGAAATGCTGGGTGAGCAGAAGAAGTCTAAGGCTGGAATGATGGCCACGGAGAAGCGAGCAGTGTCGATTGTTCATGAGTTCCTGAGTTTGACAGTGGAGAAGATGGTGGAAGTTGAGAAGATCAGCCAGTTTCGGAAATGGTTTGGGATTGATTTAAATATAAGGGATCTCTTCTTGGACCACCCAGGGATCTTCTATCTGTCAACTAAGGGTAAAAGACATACTGTTTTCCTGAGGGAAGCTTATGAACGTGGGTGTTTGGTAGAACCAAATCCTGTCTATGATGCAAGAAGACGGCTACTTGATCTTGTTGTTTTAGGACGTCGTGGTCTGCCAGCTGTTAATTCGAAGTTTCAGGATTCAAGTAGCTGCAATGAGGCTAGACAAGAGGAAAACCAGCAAAGACATGATTTGTCACCATCTTGA 1983 0.4539 MMAEHQRIHPVHDVEAPHRPLVPGNSTKSDRGFPKRTFPAMHSKPPKRRRSCCCRFLCWTLSILLILIVAIGITVGIIYLAFRPKLPNYSVDQLRISQFNVSDDNTLSATFNVAITATNPNKKIGIYYEGGSHISALYEDTQLCEGSLPKFYQGHRNTTVLDLSLTGQAQDATSLMSRIQEQLQQTNNIPLDLKVNQPVRVKLGKLKLFKVKFRVRCKLVVNNLGASDDISISSSSFESQVFDEMSNRVCIKKGLLTLMGVKFVGRLEHPTRFSMCVRSKTTSAQYVASRFRDPTFEKLMDNYKNLVKVISIQDLILANPKNPSVSIDFLSKLSQKLHLNRGAIAFLRKFPHIFHIYYDHSKLKPFCRLTDAALGVTRQEAVAINASLPVVVERLVRILSMSASRMVPLRAVFKVWKELGLPDDFEDSVLSANSGVFQLCDAHEQNTHLLKLVDGISSNDFRAAVEDWRVVECCKEDCSVDRMEMQFSFKHGYPPGMRLSQNFKAQVKEWQRLPYVGPYEMLGEQKKSKAGMMATEKRAVSIVHEFLSLTVEKMVEVEKISQFRKWFGIDLNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLVEPNPVYDARRRLLDLVVLGRRGLPAVNSKFQDSSSCNEARQEENQQRHDLSPS* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02240 660 Pfam Late embryogenesis abundant protein 115 218 IPR004864 -
Lapu6g02240 660 MobiDBLite consensus disorder prediction 1 42 - -
Lapu6g02240 660 Pfam Plant organelle RNA recognition domain 292 627 IPR021099 GO:0003723
Lapu6g02240 660 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 278 645 IPR045040 GO:0003723
Lapu6g02240 660 MobiDBLite consensus disorder prediction 1 16 - -
Lapu6g02240 660 MobiDBLite consensus disorder prediction 641 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02240 Lapu-Chr6 21858206 21861707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02240 47 230 EF-hand Containing Proteins AT5G21130 29.891 7.41e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02240 - - gmx:100808404 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02240 6 21858206 21861707 Lapu6g02240 6 21858206 21861707 ECH
Lapu6g02240 6 21858206 21861707 Lapu6g02240 6 21858206 21861707 PCT