Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01996 ATGGGCACTGTTGCCTGTTCTTCTTCTGCTCCTCCTTCTCATCACCACCTTCTCCTTCTTGGTTTCTTCTTGGCCCTCCTTCTACAAACGCTTGAGGTTGAATCCAGCGCTCTAAACTACACAACTGATAGGAAAGTCAGCAGCTTGAGACTCCAAAGGATTCAGAGACACTTGGACAACATTAACAAGACCCCTGTCCTCACCATACAGAGTCCAGATGGTGATCTCATAGATTGTGTCTACAAAAGAAAGCAACCGGCTTTAGATCACCCCCTTTTGAAGAATCACAAGATCCAGAGAGTAGCAAGTGAGATGCCAAAGGGTATGAAGGCGAGGGAAAAGAGTGGAACGGCGATGGAAATGCAAAAGTGGCACCAAAATGGGACGCTGTGTCCGAAAGGAACCGTTCCGATACGGCGGAGCACAGTGCATGACGTGCTGAGAGCAAAGTCTTTGTTTGACTTCGGAAAGAAACGACGACGCTTTTCTCTCGCACGCAGCGACGCCCCCGATGTTGTCACCGGCAATGGCCACGAGCATGCGATCGCATACACAGGATCAGCAGAGGAGGTGTATGGGGCAAAGGCAACAATAAATGTGTGGGAACCTTCCATCGAAGTGGCCAACGAATTCAGTCTCTCTCAAATTTGGATTCTTTCTGGTTCCTTTGATGGCTCTGATCTCAACAGCATTGAAGCTGGATGGCAGGTCAGTCCGGAGCTCTATGGTGACACCAGGCCCAGATTATTCACTTACTGGACGAGTGACTCATATCAAGCAACCGGTTGCTATAACCTTCTTTGTTCGGGTTTTGTGCAAACAAACAGCAGAATAGCCATTGGAGCTGCCATTTCCCCCATCTCATCCTACGATGCTAACCAATACGACATCACCATCCTCATTTGGAAGGACCCCAAAATAGGGAATTGGTGGATGAGTTTCGGTGATGGCACATTGGTGGGGTATTGGCCAGCAGAGTTGTTCACACACTTAGCCACACATGCGACCATGGTGGAGTGGGGTGGTGAAGTGGTGAATACACGTGCCGACGGTCAACACACCTCCACCCAAATGGGATCTGGGCACTTTGCTGGAGATGGTTTTGGAAAAGCAAGCTATTTCCGTAACCTTGAGATTGTAGACACCGACAATAGTCTTAGCTCGGTGCACAATATCTTAACCCTAGCTGAGAACACCAACTGTTATGACATCAAGAGCTCTTATAGTAACGAATGGGGCACATACTTCTACTATGGTGGGCCAGGCAACAATCCTCAGTGCCCATGA 1287 0.488 MGTVACSSSAPPSHHHLLLLGFFLALLLQTLEVESSALNYTTDRKVSSLRLQRIQRHLDNINKTPVLTIQSPDGDLIDCVYKRKQPALDHPLLKNHKIQRVASEMPKGMKAREKSGTAMEMQKWHQNGTLCPKGTVPIRRSTVHDVLRAKSLFDFGKKRRRFSLARSDAPDVVTGNGHEHAIAYTGSAEEVYGAKATINVWEPSIEVANEFSLSQIWILSGSFDGSDLNSIEAGWQVSPELYGDTRPRLFTYWTSDSYQATGCYNLLCSGFVQTNSRIAIGAAISPISSYDANQYDITILIWKDPKIGNWWMSFGDGTLVGYWPAELFTHLATHATMVEWGGEVVNTRADGQHTSTQMGSGHFAGDGFGKASYFRNLEIVDTDNSLSSVHNILTLAENTNCYDIKSSYSNEWGTYFYYGGPGNNPQCP* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01996 428 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 54 424 - -
Lapu6g01996 428 Gene3D - 202 317 - -
Lapu6g01996 428 Pfam Neprosin 209 421 IPR004314 -
Lapu6g01996 428 FunFam Putative carboxyl-terminal proteinase 200 320 - -
Lapu6g01996 428 Pfam Neprosin activation peptide 68 184 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01996 Lapu-Chr6 19765176 19768663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01996 - - gmx:100789333 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01996 6 19765176 19768663 Lapu6g01996 6 19765176 19768663 ECH