Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01984 ATGCTCCGTTTTTTTGGGCATATCAGACTGAATTTTGGAGGTGCACATTCAATGTTATTATCCCATGGGGAAGGCACAAGCACTCCCAATGTATCTATAAAAGCGGGCCTTACGGTTAGAGGTGATTTAAGGTTTCACAGAACAAGAGAGTTCAAATATGCTCCTCGTGTGGTAGTGCTCAAAGTGTTCTCCACCGCCAGAAAGCCAACACGCTTGTGCTTGTTAAGACCTTCTTGTAGTTTAGGGGGGAAACACAACCAAGGGATGGATTATTCTTCACCCACAACTACACAAATGCCACGACAGCAGATATTCAAATTCGTGGCAGATCGAATGCCTGTTGTTCTCAAAGATTGGAATTGGAGTAATTTACGCATCATGGCAGTAGCTGGCATATTGGTATCAATTTTAATGATCATTCCATCTGCTGATGCTGTTGATGCTCTTAAAACTTGTGCTTGCTTATTGAAGGATTGCAGGGTGGAACTGGCCAAGTGTCTTTCAAACCCATCTTGTGCTGCCAATATTGCCTGTCTACAAACTTGCAACAATCGACCTGATGAGACTGAATGCCAAATTAAATGTGGGGACCTGTTTGAAAACAGTGTGGTTGATGAATTCAATGAGTGTGCAGTCTCACGGAAGAAATGTGTACCTAAGAAATCTGACGTGGGAGAGTTTCCTGCTCCAAATCCTGATGTTCTTGTTAATAGCTTCAACATTGCGGATTTCAGTGGCAAATGGTTCATCACTAGTGGCTTAAATCCTACCTTTGATACCTTTGACTGCCAATTACACGAATTTCACACAGAATCCAATAAGCTTGTGGGTAATTTGACATGGAGAATACGGACTCCGGATGCTGGATTTCTTACTAGGTCCGCTGTGCAGAAATTTGTTCAAGATCCTTCCTATCATGGGATTCTCTACAATCATGACAACGAGTACCTTCACTATCAAGATGACTGGTATATTTTGTCATCAAAGATTGAGAAGAAACCAGATGACTACGTATTTGTATACTACCGAGGCAGAAACGATGCATGGGATGGTTATGGAGGTGCTGTTGTGTACACAAGAAGTGCAGTTCTGCCAGAATCTATAGTTCCTGAACTTGAAAAAGCAGCCAAGAATGTGGGAAGAGACTTTAGCAAGTTCATCAAGACAGATAACACATGTGGACCAGAGCCTTCTCTGGTGGAAAGGTTGGAGAAAAAGGTAGAGGAAGGAGAGGAGACCATTGTGAGGGAAGTTGAACAATTAGAGGAAGAGGTGGAGAAGGTGGGGAAAACGGAGGTCACATTGTTTCAGAAGTTGGCAGAAGGGTTTAAAGTATTTCAAGAAGATGAGGAAAATTTCTTGAAAGGACTTTCAAAAGAAGAAACGGAGATACTTAATGGCCTCAAAATGGAAGCCAGCGAAGTAGAAAAGCTCTTTGGAAATGCCTTGCCCATAAGGAAACTAAGATAA 1470 0.4218 MLRFFGHIRLNFGGAHSMLLSHGEGTSTPNVSIKAGLTVRGDLRFHRTREFKYAPRVVVLKVFSTARKPTRLCLLRPSCSLGGKHNQGMDYSSPTTTQMPRQQIFKFVADRMPVVLKDWNWSNLRIMAVAGILVSILMIIPSADAVDALKTCACLLKDCRVELAKCLSNPSCAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPKKSDVGEFPAPNPDVLVNSFNIADFSGKWFITSGLNPTFDTFDCQLHEFHTESNKLVGNLTWRIRTPDAGFLTRSAVQKFVQDPSYHGILYNHDNEYLHYQDDWYILSSKIEKKPDDYVFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELEKAAKNVGRDFSKFIKTDNTCGPEPSLVERLEKKVEEGEETIVREVEQLEEEVEKVGKTEVTLFQKLAEGFKVFQEDEENFLKGLSKEETEILNGLKMEASEVEKLFGNALPIRKLR* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01984 489 Gene3D - 222 403 IPR012674 -
Lapu6g01984 489 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED 98 478 IPR044682 GO:0010028|GO:0046422
Lapu6g01984 489 Pfam VDE lipocalin domain 151 391 IPR010788 GO:0046422
Lapu6g01984 489 SUPERFAMILY Lipocalins 228 397 IPR012674 -
Lapu6g01984 489 CDD lipocalin_VDE 223 397 - -
Lapu6g01984 489 Coils Coil 400 431 - -
Lapu6g01984 489 ProSitePatterns Lipocalin signature. 240 251 IPR022272 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01984 K09839 - gmx:100778118 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01984 6 19611649 19616402 Lapu6g01984 6 19611649 19616402 ECH