Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01891 ATGGCTCTCAGATATTTCTTCACTACAAATGCTTCAACCAGACATCATCAGTCTTCTGCTAAAACTCTTGTTCCATCTTCTCTCTCTTTAAAAAACTCACGCATGCACAGTTCCATTACTGAGACAAACGCCAAGAACAAGCCTACGGCTGACAACCTCAAGAACCTCGTCAACACTCTCGTGCTTCCTTCCATTTCATCTTCTCCACTTCACTCTCTCCACAGAGGCAACTGGGTCAAGCTTATTTGTGGTGCAAGTTTTGAGGATGTTGTTGATATCAGAAATCTCAGCCTGGTTTACACTCTTGCTGGAGTTGACTGCATTGACTGTGCTGCTGATGCATCAGTTGTTAGTGCTGTGAATGAAGGAATTGAAGCTGCAAGGGATATTGTATGCCTTAGAAGGCCGTGGGTGATGATCAGTGTCAATGATGATAAAGATCTTCATTTTCGGAAGGCCGAATTTGATCCAGAGGACTGTCCAGGAGACTGTTCACGGCCTTGTGAAAATGTGTGCCCTGCTAATGCAATATCATTCCTAGGGAAATCAACCTCGGGAATTTCATATAATATTGAAGCACCAAGATTACTGAAGGATGGAGTCATAACAGAACGCTGCTATGGCTGTGGTCGCTGTCTTCCAGTTTGCCCCTATGATAAAATAAGAGAGGTAACATATGTAAGAGATGTCATTACAACTGCTGATCTCATAAAGAGAAATGACGTTGATGCTATGGAGATACATACAAGTGGGAGACAGAGTACTTTGTTCAAACAACTCTGGAGTGCGCTGGGAGATTCAGTAGGAAATTTGAAGCTTATGGCTGTTAGCTTACCTAACGGTGGTGATTCAACAATATCCTCCATGAACAATATGTTCTCTATTATGAAACCCAATCTTCAAAGCTTCAACTTATGGCAGTTAGATGGTCGTCCTATGAGTGGAGATATTGGGAGAGGAGCAACTAAGGAATCAATTGCCTTTGCTGTTCAATTGGCTAAAGCAAAAGAAAGACCTCCTGGTTTTCTTCAACTTGCTGGCGGAACCAATGCTCACACAATTGAAGGGTTGAAAAAAGAGGGACTCTTTCAAACAACTATTACTGAATACTTGCATGATGATAAATCAGCATTAAACTCATCTGATTCACCACATGCTTTAATTAGCGGCATAGCATATGGTGGCTACGCACGCAAGATTGTTGGTAGAGTATTGAGATCAATGCAATCCCAACATGGTGGAGCTGCTTCAATTGAGGATCATTCTGAGTATCTCTTGATGGCTCTTAAGGAAGCACTTGCTTTGGTGGGGCCTATTAAATGTCTTTGA 1329 0.4214 MALRYFFTTNASTRHHQSSAKTLVPSSLSLKNSRMHSSITETNAKNKPTADNLKNLVNTLVLPSISSSPLHSLHRGNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIEAARDIVCLRRPWVMISVNDDKDLHFRKAEFDPEDCPGDCSRPCENVCPANAISFLGKSTSGISYNIEAPRLLKDGVITERCYGCGRCLPVCPYDKIREVTYVRDVITTADLIKRNDVDAMEIHTSGRQSTLFKQLWSALGDSVGNLKLMAVSLPNGGDSTISSMNNMFSIMKPNLQSFNLWQLDGRPMSGDIGRGATKESIAFAVQLAKAKERPPGFLQLAGGTNAHTIEGLKKEGLFQTTITEYLHDDKSALNSSDSPHALISGIAYGGYARKIVGRVLRSMQSQHGGAASIEDHSEYLLMALKEALALVGPIKCL* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01891 442 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 151 182 IPR017896 -
Lapu6g01891 442 Pfam Iron-Sulfur binding protein C terminal 236 437 IPR021039 -
Lapu6g01891 442 PANTHER PHOTOSYSTEM I IRON-SULFUR CENTER-RELATED 73 235 - -
Lapu6g01891 442 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 206 217 IPR017900 -
Lapu6g01891 442 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 197 226 IPR017896 -
Lapu6g01891 442 Gene3D - 155 235 - -
Lapu6g01891 442 SUPERFAMILY 4Fe-4S ferredoxins 141 230 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01891 - - gmx:100804088 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01891 6 18766601 18770852 Lapu6g01891 6 18766601 18770852 ECH