Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01885 ATGGAGGGTGCAGAGGAAGGAGTTGAGATGTTGGTGGACTCGAAGGACTTGCAGCAACAGAGCAAAGCCTTGGACAAGCTCACTGACCGCGTCGAGGATCGCCAATTGGATTCCACTCGCGTCCAAGAGGCCATGGCTTCCATCGCTGCTTCTGCCGAAGCTGATCGCAATGCCATGCGCATCAGGGAGAAAGAATTAGCTGCTGTTAAGATAAATGCAGCAGATGTTGATATAATTGCAAATGAACTAGAGTTGGATAAAAAGGTTGCTGAAAGAACTTTGCGCGAGCACAAAGGTGATGCAGTTGCTGCCATTCGGTACTTGCTTCACTAG 333 0.4925 MEGAEEGVEMLVDSKDLQQQSKALDKLTDRVEDRQLDSTRVQEAMASIAASAEADRNAMRIREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRYLLH* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01885 110 Coils Coil 80 100 - -
Lapu6g01885 110 CDD UBA_HYPK 69 109 IPR038922 -
Lapu6g01885 110 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 4 110 - -
Lapu6g01885 110 Coils Coil 17 37 - -
Lapu6g01885 110 Gene3D - 70 108 - -
Lapu6g01885 110 Pfam HYPK UBA domain 69 109 IPR044034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01885 Lapu-Chr6 18707889 18713256 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01885 - - gmx:100527445 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01885 6 18707889 18713256 Lapu6g01885 6 18707889 18713256 ECH