Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01867 ATGGCTCGGAAGGGTAATCAGCAGAAGAATGGAGTGGACCGTCATGGACTGAATCACAAAAAAGGGGTTTCTGGTGGTGTGCTTCCGGGAATGAAAGGCCATGGTAAAGGAGGGCCGGTGAAGGTTTCCCCGAGAGAGGAACTCGCTGACCGTGATAGCGGTGTTTCGCGGACTGCATGTGATGCTAGTTCTTCAGGCGATGACTTTAACAATGAGCAAAAATCAGAAAATATTTCTCGGAAAGAGAAGCAAGGGATGGCTGGAAAGCATGACCTGGAGGAGTCCTTGCCCTTTGAGATAGATTCGGGAGATGTCAGTTTGAATTCTGAAGCTGCAGTACAAGAAGAAAATGGGACTATACCTGGAAGTAATCAAGGTCATCGGAGTATTAAGAGTGGATTGAGCTGTATACTGGATAGTTTGCACCTGAAAAGTGTGGTGGATAAATTAGACCTTGCCGATAATGTGATAATTGGGAGATTAAGGTTTTCACTGTTTTCGATGTTCACAGCAATTTCAGAGTGGCTAACCAGGCAGACTCCGTTGTTTGTATCTCTTAGAACCATCATGTTTAAAGCCTATCATAATTTCAGAACGAAAGTTGTGCAGACATATCCTGTTATTCTGAAGTGGCTTATGCATTTTGGAAATGTAATGCTCCTATTATCAGTATTTTGGCTGGACTGTGCACTTCGGGGTATTGATTCATTTGTACGAATGGGTACAACGTCCTTCTTCTCTGTTATATGGTGTAGCATATTTTCCGTGATTAGTATGATAGGGGTGCTCAAGTTTCTTGCTGTCCTGGGCCTGGCTGCCTTGATTGGATTTTTTCTTGGGCTCATGCTTGCAATTTTGGTAGTTGCAATCATTGGAGTTGTTATCTTGTGGTTTTATGGTAGCTTTTGGACGACGACATTTTTCATCATCCTAGGAGGACTGGCATTTATGTTTAGTCATGAACGGGTGGCACTACTTATCACCACTGGGTATTCTGTCTATTGTGCATGGCTGTATGTTGGGTGGCTTGGTTTGCTATTGGCTTTCAATTTAGCTTTTATCTCTAGTGATGTTCTGATATACTTCCTCAAGAAAAACATAGATCAACAGAGTAGATCCAATCCTTTTGAGCAAAGAGCTGGAATGCATGGTCAACCAGGATTTAGTGATGGATCAACACATGCTTTTTCCTCTGAAAATGGACCGGGACCATCTGCTGATCACAGTGATGGCATCCCTTCAACTAGTGGGGTTGATTCGGATTTAACTTCTGAAGATGAAGTTGTCCGTTTGTTGAACTGCTCGGATCACTATGCAGCACTGGGCTTGGCAAAGTATCAAAATATAGATGTTTCAATACTAAAGCGGGAATATAGGAAAAAGGCAATGTTGGTACATCCTGACAAAAATATGGGTAATGAAAAGGCTGCTGAAGCATTTAAGAAACTTCAGAATGCGTATGAGATTCTAATGGATTCCTTGAAGCGAAAAGCTTATGACGATGAGCTAAGGAGAGAGGAGCTTTTGAGTGTATTTCGTAGATTTCATGATGCTTCTCATAAGAATGGTAGGCATGGATTCTTTCCTTCAGGATTTGCACGGTCTGATGCAGATGACAAGGACCCATTTGGTGATTCAAGGCGAATAGCCTGCAAAAGGTGTGGTGGCTTTCATGTCTGGATACACACCAAGAAACAAAAGTCTCGGGCAAGATGGTGCCAGGATTGCCAAGATTTTCATCAAGCTAAGGATGGTGATGGATGGGTTGAACAATCTTCCCAACCATTTCTTTTTGGCTTATTGCAGAAGGTGGATGCTCCTTCAGCATATGTGTGTGCTGGTAGCAGGATATACGATGCCACTGAATGGTATATCTGTCAGGGCATGAGATGTCCAGCGAACACTCATAAGCCAAGTTTTCATGTTAACACCAGTTTAATGTCCAAGAGTAATTCTGGCAAAGGAACTACTTCAGGTCAAAGAGGTGGGCGTACGCAAACACCTAATATGGAAGAAACCATGACCGAGGAAGAATTCTTTGAATGGTTACAGAATGCAGTACAGGCAGGTGTCTTTGACAATTTTAGTGGCACTGCACCAGAGAGCCCATCTCCCAAATCTGGAAATGGGATGAAAAGTCCTGGCAGTGGTGGTGGTGGTGGTGGTGGTGCTAGTGCGAGTGGCAGTAGCAGCAAGAGAAAGAAAAAGGGAAAAAAGCAATGGTGA 2226 0.4331 MARKGNQQKNGVDRHGLNHKKGVSGGVLPGMKGHGKGGPVKVSPREELADRDSGVSRTACDASSSGDDFNNEQKSENISRKEKQGMAGKHDLEESLPFEIDSGDVSLNSEAAVQEENGTIPGSNQGHRSIKSGLSCILDSLHLKSVVDKLDLADNVIIGRLRFSLFSMFTAISEWLTRQTPLFVSLRTIMFKAYHNFRTKVVQTYPVILKWLMHFGNVMLLLSVFWLDCALRGIDSFVRMGTTSFFSVIWCSIFSVISMIGVLKFLAVLGLAALIGFFLGLMLAILVVAIIGVVILWFYGSFWTTTFFIILGGLAFMFSHERVALLITTGYSVYCAWLYVGWLGLLLAFNLAFISSDVLIYFLKKNIDQQSRSNPFEQRAGMHGQPGFSDGSTHAFSSENGPGPSADHSDGIPSTSGVDSDLTSEDEVVRLLNCSDHYAALGLAKYQNIDVSILKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEILMDSLKRKAYDDELRREELLSVFRRFHDASHKNGRHGFFPSGFARSDADDKDPFGDSRRIACKRCGGFHVWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLLQKVDAPSAYVCAGSRIYDATEWYICQGMRCPANTHKPSFHVNTSLMSKSNSGKGTTSGQRGGRTQTPNMEETMTEEEFFEWLQNAVQAGVFDNFSGTAPESPSPKSGNGMKSPGSGGGGGGGASASGSSSKRKKKGKKQW* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01867 741 MobiDBLite consensus disorder prediction 642 674 - -
Lapu6g01867 741 MobiDBLite consensus disorder prediction 39 54 - -
Lapu6g01867 741 MobiDBLite consensus disorder prediction 73 89 - -
Lapu6g01867 741 Pfam DnaJ domain 436 500 IPR001623 -
Lapu6g01867 741 CDD DnaJ 436 492 IPR001623 -
Lapu6g01867 741 PRINTS DnaJ domain signature 458 473 IPR001623 -
Lapu6g01867 741 PRINTS DnaJ domain signature 475 495 IPR001623 -
Lapu6g01867 741 MobiDBLite consensus disorder prediction 693 741 - -
Lapu6g01867 741 MobiDBLite consensus disorder prediction 393 420 - -
Lapu6g01867 741 MobiDBLite consensus disorder prediction 693 711 - -
Lapu6g01867 741 SUPERFAMILY Chaperone J-domain 431 517 IPR036869 -
Lapu6g01867 741 Pfam Cleavage inducing molecular chaperone 546 643 IPR032843 -
Lapu6g01867 741 PANTHER OS03G0832900 PROTEIN 1 741 - -
Lapu6g01867 741 MobiDBLite consensus disorder prediction 57 72 - -
Lapu6g01867 741 SMART dnaj_3 435 495 IPR001623 -
Lapu6g01867 741 MobiDBLite consensus disorder prediction 642 673 - -
Lapu6g01867 741 ProSitePatterns Nt-dnaJ domain signature. 480 499 IPR018253 -
Lapu6g01867 741 Gene3D DnaJ domain 425 514 IPR036869 -
Lapu6g01867 741 ProSiteProfiles dnaJ domain profile. 436 503 IPR001623 -
Lapu6g01867 741 MobiDBLite consensus disorder prediction 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01867 Lapu-Chr6 18520735 18526707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01867 1 703 Miscellaneous Gene Families AT5G49580 51.831 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01867 K09534 - gmx:100789594 1190.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01867 6 18520735 18526707 Lapu6g01867 6 18520735 18526707 ECH