Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01861 ATGGTGAAGGTGCGCATGAACACCGCCGATGTCGCCGCCGAGGTCAAATGCCTCCGACGCCTCATCGGAATGCGCTGCTCCAACGTCTACGATCTCTCTCCCAAGACCTACGTGTTCAAGCTGATGAACAGCAGTGGGGTTTCGGAATCCGGGGAGAGCGAGAAGGTTCTGCTTCTTATGGAGAGTGGCGTGAGATTGCACTCTACTATCTATATGCGTGACAAGAGCAACACGCCTTCTGGTTTCACTCTCAAATTGAGGAAGCACATTCGGACAAGGAGGCTCGAGGATGTGCGCCAACTTGGGTACGATCGGATTATTCTCTTCCAATTTGGACTTGGGGAGAATGCAAACTATGTTATATTGGAGCTGTATGCTCAGGGGAATATCCTCCTCACAGATTCCAATTTTACCGTCATGACTCTGCTGCGGTCTCACAGGGATGATGATAAAGGGCTCGCAATTATGTCGCGTCATCGTTATCCTGTTGAAAGTTGTAGAGTTTTTGAGCGAACTACTATTGAAAAGTTGCGGGCATCTCTGGTCTCTTCCAAGGAAGATGATAATGATGAGACTGTTAAGGTCAATGGAAATGGAAGTAATGCTTCTAACGTAGCAAAAGAGAAGCAGGGAACCCAAAAGGGTGGCAAGTCATCAACACTGAAAATTGTCCTTGGGGAGGCACTTGGTTATGGACCTGCACTTTCTGAACATATTATATTAGATGCTGGCCTAATCCCTAGTACAAAAGTTCCCAAAGATAAAACGTGGGATAATGCTACTATTCAGGCTTTGGTCGAAGCTGTTGTGAAGTTTGAAGATTGGATGCAGGATATTATTTCAGGTGAAGTAGTCCCTGAAGGATTCATTTTGATGCAGAACAAAAATTTGGCGAAGGATTCTTCAATATCTCAGCCTGGAAGTGTTAGCCAGATGTATGATGAGTTCTGCCCCATCTTACTCAACCAGTTTAAGTCAAGGGATTATACAAAATTTGAGACATTTGATGCAGCCTTGGATGAGTTCTACAGCAAAATTGAGAGTCAAAGAGCGGAACAGCAGCAGAAAGCCAAAGAAAACACAGCTGCTCAGAAACTTAATAAGATTCGCCAGGATCAGGAAAATCGAGTACATGCTTTGAGGAAGGAAGCTGATCAATGTGTTAAGATGGCAGAATTGATAGAATACAACTTGGAAGATGTGGATGCTGCTATATTAGCTGTTCGTGTGGCCCTTGCAAAAGGTATGAATTGGGATGACCTTGCTCGGATGGTGAAGGAAGAAAAGAAAGCTGGAAACCCAGTAGCTGGCCTCATCGACAAGCTCCATCTTGAGAGGAACTGCATGACTTTATTGTTAAGCAACAATCTTGATGAGATGGATGATGATGAGAAGACACTCCCTGTGGATAAGGTTGAAGTTGATTTAGCTCTTTCAGCACATGCCAATGCTCGAAGGTGGTATGAACAGAAGAAAAAGCAGGAGAGCAAACAGGAAAAAACTGTAACTGCCCATGAAAAGGCTTTTAAAGCTGCAGAAAGAAAGACTCGCCTACAGCTTAATCAGGAAAAAACTGTTGCCTCAATTTCACATATGCGCAAAGTCCACTGGTTTGAGAAATTTAATTGGTTCATTACCAGTGAGAACTATTTGGTTATCAGCGGACGTGATGCACAGCAAAATGAGCTGATAGTAAAGCGGTATATGTCAAAAGGAGACCTATATGTACATGCTGATCTGCATGGAGCTTCTAGTACAGTTATCAAGAATCACAAGCCTGTGCAGCCAGTTCCACCACTGACCCTAAACCAAGCAGGATGTTTCACTGTCTGCCATAGCCAGGCGTGGGATTCAAAAATTGTTACTAGTGCCTGGTGGGTTTATCCTCATCAGGTTAGTAAAACTGCTCCTACAGGTGAATATCTGACAGTAGGGAGTTTCATGATCCGGGGAAAGAAAAATTTTCTTCCACCACACCCTCTTATCATGGGTTTTGGTCTACTATTTCGCCTGGATGAGAGTTCCTTAGGATCGCATTTAAATGAAAGAAGAGTGAGAGGAGAGGAGGAAGCAACAGATGATTTTGAAGAAAATGCTCCTCTTGAAGAAAAATCTGATTCAGAGTCTGAGAAGGATGTCACTGATATAAAATCTGCCACTGACTCAGAAATGAATGGTAAATTATCAGCCGATTCACACAAACCCCTATCAGAAGACTTTCGTGAAGATTCATCTCAAACTGGTTTGGCTACTGTCAGTGTCAAAAAGGAAATTTCACACGACTTTCTTGTGAAAGAGACAAGTACATCAAATATGGTTGATAGGGAGATATTATCAGACATTAGCGGAGATGGCTTAGTGGCTGTCACTCCTCAACTTGAGGAACTTATTGACCAAGCTCTGGAACTTGGATCTGTTGCTAAATCAAGTAAACATTATGGAACTGAGAACTCTCAAATTGATTTAGGCAATGACAAACATTTTGAACAAAGCAAAGCTGCGGTGAGGGATAAACCTTATATATCAAAAGCTGAGAGACGAAAGCTTAAGAAAGAACAGAAACATGAAGAAGCAGATTCAAATGTTGAACATGGAAAGGTTGAACCCAAACTGAAAGATACTTCTTCAAATCTACCTTCAAAAGACGATCAAAATGTGAAAAAAGGTGGTGGTCAAAAAATCAGCCGTGGGCAGAAGGGTAAACTTAAAAAGATAAAAGAGAAGTATGCTGACCAGGACGAGGAAGAAAGGAACATCCGAATGGCATTGTTGGCTTCTTCTGGAAAATCAATAAAGAAGGAAGAGACGTCATCTGAAAATGATGCATTGGACAAAGGGAAGAAATCTGGCAACGGTCCTGTTGAAGCTCCAAAAATATGTTACAAGTGTAAGAAGGCAGGTCACTTATCTCGGGATTGTAAGGAGCAATCAGATGATCTGGTGCATAGGCATGCAATTGGTGAAGCAGAAGAAAATCCCAAAATGACTGATCTTGACACTTCCCAAGCAGACAGGGTGACAATGGAAGAAGATGATATTCATGAAATAGGAGAAGAAGAAAAAGAAAAACTGAATGACGTGGATTACTTGACTGGGAATCCACTTCCTAATGACATTCTCTTGTATGCTGTTCCTGTCTGTGGTCCTTACAATGCACTTCAGTCTTACAAATATCGGGTGAAGATAATTCCTGGACCAGCGAAGAAAGGGAAAGCTGCAAAAACTGCTATGAACTTATTCAGCCACATGTCAGAAGCAACAAACCGGGAGAAGGAGTTGATGAAGGCCTGTACAGATCCTGAGCTAGTTGCTGCAATTATTGGTAATGTGAAAATATCAGCAGCCGGCCTTACTCAATTGAAGCAAAAACAGAAGAAAGGCAAGAAGAGCAGCAAACAAGCTAGTTAG 3408 0.4243 MVKVRMNTADVAAEVKCLRRLIGMRCSNVYDLSPKTYVFKLMNSSGVSESGESEKVLLLMESGVRLHSTIYMRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIILFQFGLGENANYVILELYAQGNILLTDSNFTVMTLLRSHRDDDKGLAIMSRHRYPVESCRVFERTTIEKLRASLVSSKEDDNDETVKVNGNGSNASNVAKEKQGTQKGGKSSTLKIVLGEALGYGPALSEHIILDAGLIPSTKVPKDKTWDNATIQALVEAVVKFEDWMQDIISGEVVPEGFILMQNKNLAKDSSISQPGSVSQMYDEFCPILLNQFKSRDYTKFETFDAALDEFYSKIESQRAEQQQKAKENTAAQKLNKIRQDQENRVHALRKEADQCVKMAELIEYNLEDVDAAILAVRVALAKGMNWDDLARMVKEEKKAGNPVAGLIDKLHLERNCMTLLLSNNLDEMDDDEKTLPVDKVEVDLALSAHANARRWYEQKKKQESKQEKTVTAHEKAFKAAERKTRLQLNQEKTVASISHMRKVHWFEKFNWFITSENYLVISGRDAQQNELIVKRYMSKGDLYVHADLHGASSTVIKNHKPVQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEEATDDFEENAPLEEKSDSESEKDVTDIKSATDSEMNGKLSADSHKPLSEDFREDSSQTGLATVSVKKEISHDFLVKETSTSNMVDREILSDISGDGLVAVTPQLEELIDQALELGSVAKSSKHYGTENSQIDLGNDKHFEQSKAAVRDKPYISKAERRKLKKEQKHEEADSNVEHGKVEPKLKDTSSNLPSKDDQNVKKGGGQKISRGQKGKLKKIKEKYADQDEEERNIRMALLASSGKSIKKEETSSENDALDKGKKSGNGPVEAPKICYKCKKAGHLSRDCKEQSDDLVHRHAIGEAEENPKMTDLDTSQADRVTMEEDDIHEIGEEEKEKLNDVDYLTGNPLPNDILLYAVPVCGPYNALQSYKYRVKIIPGPAKKGKAAKTAMNLFSHMSEATNREKELMKACTDPELVAAIIGNVKISAAGLTQLKQKQKKGKKSSKQAS* 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01861 1135 Pfam Zinc knuckle 959 975 IPR001878 GO:0003676|GO:0008270
Lapu6g01861 1135 Coils Coil 841 861 - -
Lapu6g01861 1135 ProSiteProfiles Zinc finger CCHC-type profile. 960 975 IPR001878 GO:0003676|GO:0008270
Lapu6g01861 1135 FunFam nuclear export mediator factor Nemf 6 163 - -
Lapu6g01861 1135 Coils Coil 363 383 - -
Lapu6g01861 1135 MobiDBLite consensus disorder prediction 815 914 - -
Lapu6g01861 1135 PANTHER NUCLEAR EXPORT MEDIATOR FACTOR NEMF 1 1111 - -
Lapu6g01861 1135 MobiDBLite consensus disorder prediction 929 952 - -
Lapu6g01861 1135 MobiDBLite consensus disorder prediction 188 216 - -
Lapu6g01861 1135 MobiDBLite consensus disorder prediction 194 216 - -
Lapu6g01861 1135 Gene3D - 955 1008 - -
Lapu6g01861 1135 Pfam NFACT protein C-terminal domain 1020 1113 IPR021846 -
Lapu6g01861 1135 Pfam NFACT N-terminal and middle domains 217 523 - -
Lapu6g01861 1135 Pfam NFACT N-terminal and middle domains 10 161 - -
Lapu6g01861 1135 MobiDBLite consensus disorder prediction 702 718 - -
Lapu6g01861 1135 Pfam NFACT protein RNA binding domain 540 651 IPR008532 -
Lapu6g01861 1135 MobiDBLite consensus disorder prediction 680 744 - -
Lapu6g01861 1135 SUPERFAMILY Retrovirus zinc finger-like domains 949 978 IPR036875 GO:0003676|GO:0008270
Lapu6g01861 1135 Gene3D ibrinogen binding protein from staphylococcus aureus domain 6 163 - -
Lapu6g01861 1135 MobiDBLite consensus disorder prediction 822 877 - -
Lapu6g01861 1135 MobiDBLite consensus disorder prediction 932 948 - -
Lapu6g01861 1135 SMART c2hcfinal6 959 975 IPR001878 GO:0003676|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01861 K24971 - gmx:100807437 1974.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01861 6 18388024 18398768 Lapu6g01861 6 18388024 18398768 ECH