Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01699 ATGAGTTTCAGAATTAGAGATCAAGAAAAGGACTCTGATTCTCCAAGAGAGGTTGGAGAGATTGACACAAGAGCTCCGTTTCAATCTGTTAAAGCAGCTGTTAGTTTATTTGGTGAAGTAGCCGTCTCAAGGGAAAAACGTTCTATCAAGAGAAGATCATCAGAGAATGTGCTGGAAAAGGAGACTCAGCTTCTCTTGGCCCAAAGAGAATTACACAAGATAAAGAAAAAGCTGGATAGTTCTGAGAACACGAAAGGAAAAGCATTATCCGAGCTTGATAGGGCCAATGTGACACTTCAAGAATTGACAAAGAAGCTCAACAGTGTGAGAGAATCTAAGCAATCAGCAATAGAAGCTGCTGAAGCTGTGAAGAATCAGGCCAAAGAACTTGAACAGGCATTATCCCAAAAAGCTATAGGATATGAAGCTTGGAAACAAGAACTAGAGCATGCAAGAAAAGAATACACAACAACAGTAAAAGAACTAGATGCTTCCAAGCAAGAACTCAACAAAATTAGGCAGGATTTTGACACAGCTTTGGAGGCAAAATTGGCTGCATTCCAAACAGCAGGAGAGGCTCAGCGTTCTGCAAAATTGAACTCAGAAAAGCTCCATGAACTCTCAAACCAAATTGCAACCATGAAAGAACAGATTGAACATTTGAAGGCTGCCTCAACACAAGCCCAAGATGGTCAGGCGAAGGCCATGGAAGAAAGGGAAGCACGACTAAGTTTCTATCAAAAAGCCAAGGAAGAAGCACAGAATAAATTAGTGGCTTTGGAGAATGAGTATGACCAGGAACTAACTCAAAGTCTAGAGGACAAACTTCATGAAACAAGTGAAGAGATTCAGGTTCTCCAAGAGCAGATGAAACAGGCACATGCTTCAGAGATGGATTCTATGAGAATAATAACTTTGGAGATCAAAGAAGCCACGAAAACCCTTCAGGAAGTTGCTGAAGAGGAAACCTCTCTGAGAAACCTAGTGGATTCCCTCAGGACAGAGTTAGAACAAGTCAAGAAAGACCAAGAGGAACTCAAGGAGAAGGAACAGGTAGCAGAAGCCCTTGCTGCTACCCTAACTGATCAACTACAGAATGCATCAGAAGAGACAAGTTCGGAGGTGGACAAAGAATCTGAAGACAGTGCTGCAGTAGAATTGAAGATCAAACAGCTTTCATTTGAGACAGAAGCTGCAAGAAGGGAAGAAGAAGAAATAAGAAGCAAAACTCAAGAGCTGAAGCATGAGGCTGAAATATCCAAAGCTGTGGCAGAAGAATTGGAGAAGAAACTAGAGCTTTATCTGAAACAGGCTGAGGAAGCAAAAGCAGCAGAACAAAAAGCCATTGAGGAGATGAAGATGATGTCTGAGAGTGACAACACTCAAGACACGGTCTCAGTTTTAGATTCCAATGGGAAGATTGTGTTGACAGTTGACGAGTTTGCAGCATTGAGTGGGAAAATCAAGGAATCTGAAGATTTGATTGACAGAACAGAAACAGCATCAATGGCTCAGGTGGAAGCAATCAACTCAAGAAAGAATGAAGTGAACAAAAAGGTGGAGGCAAACCTGAAAGCAATTGAGGAAATAAAGGTTGCAACAGACATGGCTCTGAGGAATGCAGAGATGGCAGACTCTGCAAAGGTTGCTGTTGAGGGCGAACTAAAGAAGTGGCGTCTAGAAGAACAAAACTTGGAAAACTCAGAGAATTCTCCAAGACCAATCTCTCTGCGTATTTAA 1740 0.419 MSFRIRDQEKDSDSPREVGEIDTRAPFQSVKAAVSLFGEVAVSREKRSIKRRSSENVLEKETQLLLAQRELHKIKKKLDSSENTKGKALSELDRANVTLQELTKKLNSVRESKQSAIEAAEAVKNQAKELEQALSQKAIGYEAWKQELEHARKEYTTTVKELDASKQELNKIRQDFDTALEAKLAAFQTAGEAQRSAKLNSEKLHELSNQIATMKEQIEHLKAASTQAQDGQAKAMEEREARLSFYQKAKEEAQNKLVALENEYDQELTQSLEDKLHETSEEIQVLQEQMKQAHASEMDSMRIITLEIKEATKTLQEVAEEETSLRNLVDSLRTELEQVKKDQEELKEKEQVAEALAATLTDQLQNASEETSSEVDKESEDSAAVELKIKQLSFETEAARREEEEIRSKTQELKHEAEISKAVAEELEKKLELYLKQAEEAKAAEQKAIEEMKMMSESDNTQDTVSVLDSNGKIVLTVDEFAALSGKIKESEDLIDRTETASMAQVEAINSRKNEVNKKVEANLKAIEEIKVATDMALRNAEMADSAKVAVEGELKKWRLEEQNLENSENSPRPISLRI* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01699 579 Coils Coil 197 224 - -
Lapu6g01699 579 MobiDBLite consensus disorder prediction 1 20 - -
Lapu6g01699 579 Coils Coil 141 182 - -
Lapu6g01699 579 Coils Coil 548 568 - -
Lapu6g01699 579 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 19 564 - -
Lapu6g01699 579 Coils Coil 301 370 - -
Lapu6g01699 579 MobiDBLite consensus disorder prediction 1 23 - -
Lapu6g01699 579 MobiDBLite consensus disorder prediction 398 417 - -
Lapu6g01699 579 Pfam Weak chloroplast movement under blue light 20 563 IPR008545 -
Lapu6g01699 579 Coils Coil 64 137 - -
Lapu6g01699 579 Coils Coil 392 455 - -
Lapu6g01699 579 Coils Coil 236 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01699 Lapu-Chr6 16860515 16862745 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01699 - - gmx:100818297 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01699 6 16860515 16862745 Lapu6g01699 6 16860515 16862745 ECH
Lapu3g00058 3 933588 936103 Lapu6g01699 6 16860515 16862745 PCT