Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01618 ATGGCATCGTCAGCAGCGCCGTCGCTGAACGCGGTGCTGGACCGCGTCAAAGGGGCTACGGAGCGCGCTGGCCGGAATGTGCAAGAGATCCGCGTTGTGGCGGCTAGCAAGACCAAGTCAGTTTCTACTATCCGTCAGGTATACGACGCCGGCCACAGATTCTTCGGCGAGAACTACGTTCAGGAACTCCTTCAAAAAGCTCCTCAGCTTCCCGATGATATCGAGTGGCATCTCATTGGCAATTTGCAGAGTAACAAAGTCAAGCCTCTTATCGCTGGTGTTCCCAACCTTGCTTGTGTAGAAACTGTGGATGATGAGAAGATAGCAAATCTTCTTGATCGCGCTGTAGCAAATGTTGGCAGGAAACCATTGAAGGTTTTTGTTCAAGTGAATACGAGCGGAGAAACCTCCAAATTTGGTGTTGAACCAGCTCTGTGTGTGGATCTTGTAAAGCACATCACAAACTGCTCAAACCTTGAGTTTTCTGGTCTAATGACAATTGGCATGCTGGATTATTCATCCACCCCAGAAAATTTTAAGATGTTGTCCAATTGCAGAAGTGAAGTTTGTAAAGCACTTGGCATATCAGAAACGCAATGTGAGCTATCAATGGGCATGACTGGAGACTTTGAGCAAGCTATCGAGATGGGAAGTACCAATGTTAGGATTGGAACTGCCATATTTGGAGCCAGAGAATATCCAACGAAAGAAGAGAAGTAG 720 0.4708 MASSAAPSLNAVLDRVKGATERAGRNVQEIRVVAASKTKSVSTIRQVYDAGHRFFGENYVQELLQKAPQLPDDIEWHLIGNLQSNKVKPLIAGVPNLACVETVDDEKIANLLDRAVANVGRKPLKVFVQVNTSGETSKFGVEPALCVDLVKHITNCSNLEFSGLMTIGMLDYSSTPENFKMLSNCRSEVCKALGISETQCELSMGMTGDFEQAIEMGSTNVRIGTAIFGAREYPTKEEK* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01618 239 Gene3D Alanine racemase 1 239 IPR029066 -
Lapu6g01618 239 Pfam Alanine racemase, N-terminal domain 11 231 IPR001608 -
Lapu6g01618 239 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 4 236 IPR011078 GO:0030170
Lapu6g01618 239 SUPERFAMILY PLP-binding barrel 5 229 IPR029066 -
Lapu6g01618 239 Hamap Pyridoxal phosphate homeostasis protein. 7 230 IPR011078 GO:0030170
Lapu6g01618 239 PIRSF YBL036c_PLPDEIII 2 237 IPR011078 GO:0030170
Lapu6g01618 239 FunFam Pyridoxal phosphate homeostasis protein 1 238 - -
Lapu6g01618 239 CDD PLPDE_III_YBL036c_euk 9 229 - -
Lapu6g01618 239 NCBIfam YggS family pyridoxal phosphate-dependent enzyme 8 231 IPR011078 GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01618 Lapu-Chr6 16051624 16054535 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01618 K06997 - gmx:100527295 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01618 6 16051624 16054535 Lapu6g01618 6 16051624 16054535 ECH