Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01459 ATGGCAACATTTATCCGAAATTTAGCTATCAGCCATGCTTTTCTTGCAATTTTTCTCTCAGCAGGTATTGGAGTTTTTCTAGGTGTTGAGTCTTTTGGAATCAACTATGGTCAAGTGGCTAACAATTTGCCACCACCAGACAAAGTCCTTGAATTGTTGAGCACCCTTAACCTCACAAAAACAAGAATCTATGATACTAATCCTGATATTTTGAGTTCTTTTGCCAACTCAAACATTGAAATCATTGTGACAGTGGAAAATGAAATACTAAGCCAGTTGGATGATCCTCAACAAGCTGCTCAATGGGTGAACAGCCACATCATACCGTACCTACCCGAGACAAAGATCACAGGGGTTCAGGTTGGGAATGAGGTCTTTACTGATGATGACACTACTCTTATTCAGCACCTTGTTCCAGCAGTGGTGAACATTCACAATGCTCTAGCTCAGTTAGGTTACTCAAACATCAAAGTTTCAACACCTAGTTCGTTGGCAGTGCTTGCTGCTTCGTACCCTCCTTCAGCTGGTAGTTTCAAAAGTGAAATCTCTGGGATCATGTACCAGTTTTTGAACTTCTTGTCAACCTCTAAGTCCCCCTTTTGGATCAATGCCTACCCCTACTTTGCTTACAAGGATAGTCCTAATGGGATTTCTTTGAACTATGTGCTGTTCAATCCCAATGCAGGAATGGTTGACCCTTACACCAATCTCCACTACGATAACATGCTTTATGCCATGGTGGATGCTGTTTCATTTGCCATCGCTAAAATGGGCTTCAAGGGGATAGAGGTTAGGGTCTCTGAGACTGGTTGGCCATCAAAGGGAGACGCTGATGAGGTTGGTGCCACGCCAATGAATGCTGCAACTTACAACAGGAATTTGTTGAGAAGGCAAATGGCAGGTGAAGGGACACCTTTGAATCCTAGAATGAGGTTGGAAGTGTACTTGTTTGCGTTGTTCAATGAAGACTTGAAGCCTGGACCAACCTCAGAACGAAATTACGGTCTCTTTCGTCCTGATGAATCCATGACTTACAATGTTGGCTTGTCTGCTCTTGCAACCTCATCAGCATCAACTTCCTCCTCCTCTTCAATTTCTCTTGCTTCCTCTGGTGCTAGGGTTAAGGTAGTAGCACCATGGGAATGCAAAAGCTTGGTGAACTGGATATTTGTATGTGTACTGATTTCAACCCTTTATGGGTGA 1203 0.4323 MATFIRNLAISHAFLAIFLSAGIGVFLGVESFGINYGQVANNLPPPDKVLELLSTLNLTKTRIYDTNPDILSSFANSNIEIIVTVENEILSQLDDPQQAAQWVNSHIIPYLPETKITGVQVGNEVFTDDDTTLIQHLVPAVVNIHNALAQLGYSNIKVSTPSSLAVLAASYPPSAGSFKSEISGIMYQFLNFLSTSKSPFWINAYPYFAYKDSPNGISLNYVLFNPNAGMVDPYTNLHYDNMLYAMVDAVSFAIAKMGFKGIEVRVSETGWPSKGDADEVGATPMNAATYNRNLLRRQMAGEGTPLNPRMRLEVYLFALFNEDLKPGPTSERNYGLFRPDESMTYNVGLSALATSSASTSSSSSISLASSGARVKVVAPWECKSLVNWIFVCVLISTLYG* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01459 400 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 23 357 IPR044965 GO:0004553|GO:0005975
Lapu6g01459 400 SUPERFAMILY (Trans)glycosidases 32 347 IPR017853 -
Lapu6g01459 400 Gene3D Glycosidases 30 355 - -
Lapu6g01459 400 FunFam Glucan endo-1,3-beta-glucosidase 14 30 355 - -
Lapu6g01459 400 Pfam Glycosyl hydrolases family 17 33 347 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01459 Lapu-Chr6 14383626 14386195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01459 3 377 Glycoside Hydrolase AT4G18340 63.564 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01459 - - vra:106775269 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01459 6 14383626 14386195 Lapu6g01459 6 14383626 14386195 ECH